Gene : Thhalv10007540m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR35695:SF1 - GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  248
Name:  ? Thhalv10007540m.g Secondary Identifier:  ? PAC:20186921
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY0-1319 Eutrema salsugineum pathologic  
Esalsugineum PWY4FS-7 Eutrema salsugineum pathologic  
Esalsugineum PWY-7411 Eutrema salsugineum pathologic  
Esalsugineum TRIGLSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007540m.g 0.5kb upstream 0.5kb upstream 3929 true scaffold_5: 2899883-2903811 Eutrema salsugineum
Thhalv10007540m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2899883-2900382 Eutrema salsugineum
Thhalv10007540m.g 0.5kb downstream 0.5kb downstream 3929 true scaffold_5: 2900383-2904311 Eutrema salsugineum
Thhalv10007540m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2903812-2904311 Eutrema salsugineum
Thhalv10007540m.g 1.0kb upstream 1.0kb upstream 4429 true scaffold_5: 2899383-2903811 Eutrema salsugineum
Thhalv10007540m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2899383-2900382 Eutrema salsugineum
Thhalv10007540m.g 1.0kb downstream 1.0kb downstream 4429 true scaffold_5: 2900383-2904811 Eutrema salsugineum
Thhalv10007540m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2903812-2904811 Eutrema salsugineum
Thhalv10007540m.g 2.0kb upstream 2.0kb upstream 5429 true scaffold_5: 2898383-2903811 Eutrema salsugineum
Thhalv10007540m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2898383-2900382 Eutrema salsugineum
Thhalv10007540m.g 2.0kb downstream 2.0kb downstream 5429 true scaffold_5: 2900383-2905811 Eutrema salsugineum
Thhalv10007540m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2903812-2905811 Eutrema salsugineum
Thhalv10007540m.g 5.0kb upstream 5.0kb upstream 8429 true scaffold_5: 2895383-2903811 Eutrema salsugineum
Thhalv10007540m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2895383-2900382 Eutrema salsugineum
Thhalv10007540m.g 5.0kb downstream 5.0kb downstream 8429 true scaffold_5: 2900383-2908811 Eutrema salsugineum
Thhalv10007540m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2903812-2908811 Eutrema salsugineum
Thhalv10007540m.g 10.0kb upstream 10.0kb upstream 13429 true scaffold_5: 2890383-2903811 Eutrema salsugineum
Thhalv10007540m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2890383-2900382 Eutrema salsugineum
Thhalv10007540m.g 10.0kb downstream 10.0kb downstream 13429 true scaffold_5: 2900383-2913811 Eutrema salsugineum
Thhalv10007540m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2903812-2913811 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360786 5261 Brassicaceae View MSA
123840834 5264 Brassicales-Malvales View MSA
124339399 5266 SBM View MSA
124237603 5268 Malvidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain