Gene : Thhalv10007576m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR31332:SF0 - 7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC Genomic Order:  2791
Name:  ? Thhalv10007576m.g Secondary Identifier:  ? PAC:20186886
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5068 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007576m.g 0.5kb upstream 0.5kb upstream 4230 true scaffold_5: 14334815-14339044 Eutrema salsugineum
Thhalv10007576m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 14334815-14335314 Eutrema salsugineum
Thhalv10007576m.g 0.5kb downstream 0.5kb downstream 4230 true scaffold_5: 14335315-14339544 Eutrema salsugineum
Thhalv10007576m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 14339045-14339544 Eutrema salsugineum
Thhalv10007576m.g 1.0kb upstream 1.0kb upstream 4730 true scaffold_5: 14334315-14339044 Eutrema salsugineum
Thhalv10007576m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 14334315-14335314 Eutrema salsugineum
Thhalv10007576m.g 1.0kb downstream 1.0kb downstream 4730 true scaffold_5: 14335315-14340044 Eutrema salsugineum
Thhalv10007576m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 14339045-14340044 Eutrema salsugineum
Thhalv10007576m.g 2.0kb upstream 2.0kb upstream 5730 true scaffold_5: 14333315-14339044 Eutrema salsugineum
Thhalv10007576m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 14333315-14335314 Eutrema salsugineum
Thhalv10007576m.g 2.0kb downstream 2.0kb downstream 5730 true scaffold_5: 14335315-14341044 Eutrema salsugineum
Thhalv10007576m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 14339045-14341044 Eutrema salsugineum
Thhalv10007576m.g 5.0kb upstream 5.0kb upstream 8730 true scaffold_5: 14330315-14339044 Eutrema salsugineum
Thhalv10007576m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 14330315-14335314 Eutrema salsugineum
Thhalv10007576m.g 5.0kb downstream 5.0kb downstream 8730 true scaffold_5: 14335315-14344044 Eutrema salsugineum
Thhalv10007576m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 14339045-14344044 Eutrema salsugineum
Thhalv10007576m.g 10.0kb upstream 10.0kb upstream 13730 true scaffold_5: 14325315-14339044 Eutrema salsugineum
Thhalv10007576m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 14325315-14335314 Eutrema salsugineum
Thhalv10007576m.g 10.0kb downstream 10.0kb downstream 13730 true scaffold_5: 14335315-14349044 Eutrema salsugineum
Thhalv10007576m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 14339045-14349044 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371719 5261 Brassicaceae View MSA
123830449 5264 Brassicales-Malvales View MSA
124343484 5266 SBM View MSA
124240416 5268 Malvidae View MSA
124061681 5270 Rosid View MSA
123745545 5271 Pentapetalae View MSA
122786931 5272 Eudicot View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain