Gene : Thhalv10008148m.g E. salsugineum v1.0
Defline:  (1 of 5) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  1791
Name:  ? Thhalv10008148m.g Secondary Identifier:  ? PAC:20186157
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5083 Eutrema salsugineum pathologic  
Esalsugineum PWY-6348 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008148m.g 0.5kb upstream 0.5kb upstream 3490 true scaffold_5: 10400784-10404273 Eutrema salsugineum
Thhalv10008148m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10403774-10404273 Eutrema salsugineum
Thhalv10008148m.g 0.5kb downstream 0.5kb downstream 3490 true scaffold_5: 10400284-10403773 Eutrema salsugineum
Thhalv10008148m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10400284-10400783 Eutrema salsugineum
Thhalv10008148m.g 1.0kb upstream 1.0kb upstream 3990 true scaffold_5: 10400784-10404773 Eutrema salsugineum
Thhalv10008148m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10403774-10404773 Eutrema salsugineum
Thhalv10008148m.g 1.0kb downstream 1.0kb downstream 3990 true scaffold_5: 10399784-10403773 Eutrema salsugineum
Thhalv10008148m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10399784-10400783 Eutrema salsugineum
Thhalv10008148m.g 2.0kb upstream 2.0kb upstream 4990 true scaffold_5: 10400784-10405773 Eutrema salsugineum
Thhalv10008148m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10403774-10405773 Eutrema salsugineum
Thhalv10008148m.g 2.0kb downstream 2.0kb downstream 4990 true scaffold_5: 10398784-10403773 Eutrema salsugineum
Thhalv10008148m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10398784-10400783 Eutrema salsugineum
Thhalv10008148m.g 5.0kb upstream 5.0kb upstream 7990 true scaffold_5: 10400784-10408773 Eutrema salsugineum
Thhalv10008148m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10403774-10408773 Eutrema salsugineum
Thhalv10008148m.g 5.0kb downstream 5.0kb downstream 7990 true scaffold_5: 10395784-10403773 Eutrema salsugineum
Thhalv10008148m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10395784-10400783 Eutrema salsugineum
Thhalv10008148m.g 10.0kb upstream 10.0kb upstream 12990 true scaffold_5: 10400784-10413773 Eutrema salsugineum
Thhalv10008148m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10403774-10413773 Eutrema salsugineum
Thhalv10008148m.g 10.0kb downstream 10.0kb downstream 12990 true scaffold_5: 10390784-10403773 Eutrema salsugineum
Thhalv10008148m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10390784-10400783 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364267 5261 Brassicaceae View MSA
123841578 5264 Brassicales-Malvales View MSA
124349660 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain