Gene : Thhalv10008145m.g E. salsugineum v1.0
Defline:  (1 of 5) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  777
Name:  ? Thhalv10008145m.g Secondary Identifier:  ? PAC:20186123
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5083 Eutrema salsugineum pathologic  
Esalsugineum PWY-6348 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008145m.g 0.5kb upstream 0.5kb upstream 2464 true scaffold_5: 6086755-6089218 Eutrema salsugineum
Thhalv10008145m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6088719-6089218 Eutrema salsugineum
Thhalv10008145m.g 0.5kb downstream 0.5kb downstream 2464 true scaffold_5: 6086255-6088718 Eutrema salsugineum
Thhalv10008145m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6086255-6086754 Eutrema salsugineum
Thhalv10008145m.g 1.0kb upstream 1.0kb upstream 2964 true scaffold_5: 6086755-6089718 Eutrema salsugineum
Thhalv10008145m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6088719-6089718 Eutrema salsugineum
Thhalv10008145m.g 1.0kb downstream 1.0kb downstream 2964 true scaffold_5: 6085755-6088718 Eutrema salsugineum
Thhalv10008145m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6085755-6086754 Eutrema salsugineum
Thhalv10008145m.g 2.0kb upstream 2.0kb upstream 3964 true scaffold_5: 6086755-6090718 Eutrema salsugineum
Thhalv10008145m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6088719-6090718 Eutrema salsugineum
Thhalv10008145m.g 2.0kb downstream 2.0kb downstream 3964 true scaffold_5: 6084755-6088718 Eutrema salsugineum
Thhalv10008145m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6084755-6086754 Eutrema salsugineum
Thhalv10008145m.g 5.0kb upstream 5.0kb upstream 6964 true scaffold_5: 6086755-6093718 Eutrema salsugineum
Thhalv10008145m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6088719-6093718 Eutrema salsugineum
Thhalv10008145m.g 5.0kb downstream 5.0kb downstream 6964 true scaffold_5: 6081755-6088718 Eutrema salsugineum
Thhalv10008145m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6081755-6086754 Eutrema salsugineum
Thhalv10008145m.g 10.0kb upstream 10.0kb upstream 11964 true scaffold_5: 6086755-6098718 Eutrema salsugineum
Thhalv10008145m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6088719-6098718 Eutrema salsugineum
Thhalv10008145m.g 10.0kb downstream 10.0kb downstream 11964 true scaffold_5: 6076755-6088718 Eutrema salsugineum
Thhalv10008145m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6076755-6086754 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364034 5261 Brassicaceae View MSA
123841578 5264 Brassicales-Malvales View MSA
124349660 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain