Gene : Thhalv10008064m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR22603:SF39 - CHOLINE KINASE 1-RELATED Genomic Order:  57
Name:  ? Thhalv10008064m.g Secondary Identifier:  ? PAC:20188314
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3385 Eutrema salsugineum pathologic  
Esalsugineum PWY3O-450 Eutrema salsugineum pathologic  
Esalsugineum PWY4FS-6 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008064m.g 0.5kb upstream 0.5kb upstream 4657 true scaffold_5: 955511-960167 Eutrema salsugineum
Thhalv10008064m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 959668-960167 Eutrema salsugineum
Thhalv10008064m.g 0.5kb downstream 0.5kb downstream 4657 true scaffold_5: 955011-959667 Eutrema salsugineum
Thhalv10008064m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 955011-955510 Eutrema salsugineum
Thhalv10008064m.g 1.0kb upstream 1.0kb upstream 5157 true scaffold_5: 955511-960667 Eutrema salsugineum
Thhalv10008064m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 959668-960667 Eutrema salsugineum
Thhalv10008064m.g 1.0kb downstream 1.0kb downstream 5157 true scaffold_5: 954511-959667 Eutrema salsugineum
Thhalv10008064m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 954511-955510 Eutrema salsugineum
Thhalv10008064m.g 2.0kb upstream 2.0kb upstream 6157 true scaffold_5: 955511-961667 Eutrema salsugineum
Thhalv10008064m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 959668-961667 Eutrema salsugineum
Thhalv10008064m.g 2.0kb downstream 2.0kb downstream 6157 true scaffold_5: 953511-959667 Eutrema salsugineum
Thhalv10008064m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 953511-955510 Eutrema salsugineum
Thhalv10008064m.g 5.0kb upstream 5.0kb upstream 9157 true scaffold_5: 955511-964667 Eutrema salsugineum
Thhalv10008064m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 959668-964667 Eutrema salsugineum
Thhalv10008064m.g 5.0kb downstream 5.0kb downstream 9157 true scaffold_5: 950511-959667 Eutrema salsugineum
Thhalv10008064m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 950511-955510 Eutrema salsugineum
Thhalv10008064m.g 10.0kb upstream 10.0kb upstream 14157 true scaffold_5: 955511-969667 Eutrema salsugineum
Thhalv10008064m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 959668-969667 Eutrema salsugineum
Thhalv10008064m.g 10.0kb downstream 10.0kb downstream 14157 true scaffold_5: 945511-959667 Eutrema salsugineum
Thhalv10008064m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 945511-955510 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372650 5261 Brassicaceae View MSA
123840519 5264 Brassicales-Malvales View MSA
124340711 5266 SBM View MSA
124247486 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain