Gene : Thhalv10009411m.g E. salsugineum v1.0
Defline:  (1 of 5) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  119
Name:  ? Thhalv10009411m.g Secondary Identifier:  ? PAC:20185582
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum TRNA-CHARGING-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009411m.g 0.5kb upstream 0.5kb upstream 3734 true scaffold_5: 1648081-1651814 Eutrema salsugineum
Thhalv10009411m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1651315-1651814 Eutrema salsugineum
Thhalv10009411m.g 0.5kb downstream 0.5kb downstream 3734 true scaffold_5: 1647581-1651314 Eutrema salsugineum
Thhalv10009411m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1647581-1648080 Eutrema salsugineum
Thhalv10009411m.g 1.0kb upstream 1.0kb upstream 4234 true scaffold_5: 1648081-1652314 Eutrema salsugineum
Thhalv10009411m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1651315-1652314 Eutrema salsugineum
Thhalv10009411m.g 1.0kb downstream 1.0kb downstream 4234 true scaffold_5: 1647081-1651314 Eutrema salsugineum
Thhalv10009411m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1647081-1648080 Eutrema salsugineum
Thhalv10009411m.g 2.0kb upstream 2.0kb upstream 5234 true scaffold_5: 1648081-1653314 Eutrema salsugineum
Thhalv10009411m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1651315-1653314 Eutrema salsugineum
Thhalv10009411m.g 2.0kb downstream 2.0kb downstream 5234 true scaffold_5: 1646081-1651314 Eutrema salsugineum
Thhalv10009411m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1646081-1648080 Eutrema salsugineum
Thhalv10009411m.g 5.0kb upstream 5.0kb upstream 8234 true scaffold_5: 1648081-1656314 Eutrema salsugineum
Thhalv10009411m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1651315-1656314 Eutrema salsugineum
Thhalv10009411m.g 5.0kb downstream 5.0kb downstream 8234 true scaffold_5: 1643081-1651314 Eutrema salsugineum
Thhalv10009411m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1643081-1648080 Eutrema salsugineum
Thhalv10009411m.g 10.0kb upstream 10.0kb upstream 13234 true scaffold_5: 1648081-1661314 Eutrema salsugineum
Thhalv10009411m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1651315-1661314 Eutrema salsugineum
Thhalv10009411m.g 10.0kb downstream 10.0kb downstream 13234 true scaffold_5: 1638081-1651314 Eutrema salsugineum
Thhalv10009411m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1638081-1648080 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360155 5261 Brassicaceae View MSA
123840643 5264 Brassicales-Malvales View MSA
124345424 5266 SBM View MSA
124237184 5268 Malvidae View MSA
124066090 5270 Rosid View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain