Gene : Thhalv10008995m.g E. salsugineum v1.0
Defline:  (1 of 5) PTHR14155:SF175 - E3 UBIQUITIN-PROTEIN LIGASE RHA2B-RELATED Genomic Order:  1756
Name:  ? Thhalv10008995m.g Secondary Identifier:  ? PAC:20187568
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10008995m.g 0.5kb upstream 0.5kb upstream 1310 true scaffold_5: 10264094-10265403 Eutrema salsugineum
Thhalv10008995m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10264094-10264593 Eutrema salsugineum
Thhalv10008995m.g 0.5kb downstream 0.5kb downstream 1310 true scaffold_5: 10264594-10265903 Eutrema salsugineum
Thhalv10008995m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10265404-10265903 Eutrema salsugineum
Thhalv10008995m.g 1.0kb upstream 1.0kb upstream 1810 true scaffold_5: 10263594-10265403 Eutrema salsugineum
Thhalv10008995m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10263594-10264593 Eutrema salsugineum
Thhalv10008995m.g 1.0kb downstream 1.0kb downstream 1810 true scaffold_5: 10264594-10266403 Eutrema salsugineum
Thhalv10008995m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10265404-10266403 Eutrema salsugineum
Thhalv10008995m.g 2.0kb upstream 2.0kb upstream 2810 true scaffold_5: 10262594-10265403 Eutrema salsugineum
Thhalv10008995m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10262594-10264593 Eutrema salsugineum
Thhalv10008995m.g 2.0kb downstream 2.0kb downstream 2810 true scaffold_5: 10264594-10267403 Eutrema salsugineum
Thhalv10008995m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10265404-10267403 Eutrema salsugineum
Thhalv10008995m.g 5.0kb upstream 5.0kb upstream 5810 true scaffold_5: 10259594-10265403 Eutrema salsugineum
Thhalv10008995m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10259594-10264593 Eutrema salsugineum
Thhalv10008995m.g 5.0kb downstream 5.0kb downstream 5810 true scaffold_5: 10264594-10270403 Eutrema salsugineum
Thhalv10008995m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10265404-10270403 Eutrema salsugineum
Thhalv10008995m.g 10.0kb upstream 10.0kb upstream 10810 true scaffold_5: 10254594-10265403 Eutrema salsugineum
Thhalv10008995m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10254594-10264593 Eutrema salsugineum
Thhalv10008995m.g 10.0kb downstream 10.0kb downstream 10810 true scaffold_5: 10264594-10275403 Eutrema salsugineum
Thhalv10008995m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10265404-10275403 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369063 5261 Brassicaceae View MSA
123827818 5264 Brassicales-Malvales View MSA
124343152 5266 SBM View MSA
124251223 5268 Malvidae View MSA
124069970 5270 Rosid View MSA
123750154 5271 Pentapetalae View MSA
122792700 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain