Gene : Thhalv10003806m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11452:SF14 - ALPHA-GALACTOSIDASE A Genomic Order:  1585
Name:  ? Thhalv10003806m.g Secondary Identifier:  ? PAC:20198955
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY0-1301 Eutrema salsugineum pathologic  
Esalsugineum PWY-6527 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003806m.g 0.5kb upstream 0.5kb upstream 3771 true scaffold_6: 6423334-6427104 Eutrema salsugineum
Thhalv10003806m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6426605-6427104 Eutrema salsugineum
Thhalv10003806m.g 0.5kb downstream 0.5kb downstream 3771 true scaffold_6: 6422834-6426604 Eutrema salsugineum
Thhalv10003806m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6422834-6423333 Eutrema salsugineum
Thhalv10003806m.g 1.0kb upstream 1.0kb upstream 4271 true scaffold_6: 6423334-6427604 Eutrema salsugineum
Thhalv10003806m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6426605-6427604 Eutrema salsugineum
Thhalv10003806m.g 1.0kb downstream 1.0kb downstream 4271 true scaffold_6: 6422334-6426604 Eutrema salsugineum
Thhalv10003806m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6422334-6423333 Eutrema salsugineum
Thhalv10003806m.g 2.0kb upstream 2.0kb upstream 5271 true scaffold_6: 6423334-6428604 Eutrema salsugineum
Thhalv10003806m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6426605-6428604 Eutrema salsugineum
Thhalv10003806m.g 2.0kb downstream 2.0kb downstream 5271 true scaffold_6: 6421334-6426604 Eutrema salsugineum
Thhalv10003806m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6421334-6423333 Eutrema salsugineum
Thhalv10003806m.g 5.0kb upstream 5.0kb upstream 8271 true scaffold_6: 6423334-6431604 Eutrema salsugineum
Thhalv10003806m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6426605-6431604 Eutrema salsugineum
Thhalv10003806m.g 5.0kb downstream 5.0kb downstream 8271 true scaffold_6: 6418334-6426604 Eutrema salsugineum
Thhalv10003806m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6418334-6423333 Eutrema salsugineum
Thhalv10003806m.g 10.0kb upstream 10.0kb upstream 13271 true scaffold_6: 6423334-6436604 Eutrema salsugineum
Thhalv10003806m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6426605-6436604 Eutrema salsugineum
Thhalv10003806m.g 10.0kb downstream 10.0kb downstream 13271 true scaffold_6: 6413334-6426604 Eutrema salsugineum
Thhalv10003806m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6413334-6423333 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364962 5261 Brassicaceae View MSA
123827886 5264 Brassicales-Malvales View MSA
124343227 5266 SBM View MSA
124238425 5268 Malvidae View MSA
124064341 5270 Rosid View MSA
123740921 5271 Pentapetalae View MSA
122794912 5272 Eudicot View MSA
122043993 5273 Angiosperm View MSA
121347299 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain