Gene : Thhalv10003821m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  79
Name:  ? Thhalv10003821m.g Secondary Identifier:  ? PAC:20198396
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-4302 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  
Esalsugineum PWY-7279 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003821m.g 0.5kb upstream 0.5kb upstream 4494 true scaffold_6: 279083-283576 Eutrema salsugineum
Thhalv10003821m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 279083-279582 Eutrema salsugineum
Thhalv10003821m.g 0.5kb downstream 0.5kb downstream 4494 true scaffold_6: 279583-284076 Eutrema salsugineum
Thhalv10003821m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 283577-284076 Eutrema salsugineum
Thhalv10003821m.g 1.0kb upstream 1.0kb upstream 4994 true scaffold_6: 278583-283576 Eutrema salsugineum
Thhalv10003821m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 278583-279582 Eutrema salsugineum
Thhalv10003821m.g 1.0kb downstream 1.0kb downstream 4994 true scaffold_6: 279583-284576 Eutrema salsugineum
Thhalv10003821m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 283577-284576 Eutrema salsugineum
Thhalv10003821m.g 2.0kb upstream 2.0kb upstream 5994 true scaffold_6: 277583-283576 Eutrema salsugineum
Thhalv10003821m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 277583-279582 Eutrema salsugineum
Thhalv10003821m.g 2.0kb downstream 2.0kb downstream 5994 true scaffold_6: 279583-285576 Eutrema salsugineum
Thhalv10003821m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 283577-285576 Eutrema salsugineum
Thhalv10003821m.g 5.0kb upstream 5.0kb upstream 8994 true scaffold_6: 274583-283576 Eutrema salsugineum
Thhalv10003821m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 274583-279582 Eutrema salsugineum
Thhalv10003821m.g 5.0kb downstream 5.0kb downstream 8994 true scaffold_6: 279583-288576 Eutrema salsugineum
Thhalv10003821m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 283577-288576 Eutrema salsugineum
Thhalv10003821m.g 10.0kb upstream 10.0kb upstream 13994 true scaffold_6: 269583-283576 Eutrema salsugineum
Thhalv10003821m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 269583-279582 Eutrema salsugineum
Thhalv10003821m.g 10.0kb downstream 10.0kb downstream 13994 true scaffold_6: 279583-293576 Eutrema salsugineum
Thhalv10003821m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 283577-293576 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372416 5261 Brassicaceae View MSA
123827742 5264 Brassicales-Malvales View MSA
124339577 5266 SBM View MSA
124254053 5268 Malvidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain