Gene : Thhalv10004120m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR13370 - RNA METHYLASE-RELATED Genomic Order:  1583
Name:  ? Thhalv10004120m.g Secondary Identifier:  ? PAC:20199411
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6829 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004120m.g 0.5kb upstream 0.5kb upstream 2456 true scaffold_6: 6417449-6419904 Eutrema salsugineum
Thhalv10004120m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6417449-6417948 Eutrema salsugineum
Thhalv10004120m.g 0.5kb downstream 0.5kb downstream 2456 true scaffold_6: 6417949-6420404 Eutrema salsugineum
Thhalv10004120m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6419905-6420404 Eutrema salsugineum
Thhalv10004120m.g 1.0kb upstream 1.0kb upstream 2956 true scaffold_6: 6416949-6419904 Eutrema salsugineum
Thhalv10004120m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6416949-6417948 Eutrema salsugineum
Thhalv10004120m.g 1.0kb downstream 1.0kb downstream 2956 true scaffold_6: 6417949-6420904 Eutrema salsugineum
Thhalv10004120m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6419905-6420904 Eutrema salsugineum
Thhalv10004120m.g 2.0kb upstream 2.0kb upstream 3956 true scaffold_6: 6415949-6419904 Eutrema salsugineum
Thhalv10004120m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6415949-6417948 Eutrema salsugineum
Thhalv10004120m.g 2.0kb downstream 2.0kb downstream 3956 true scaffold_6: 6417949-6421904 Eutrema salsugineum
Thhalv10004120m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6419905-6421904 Eutrema salsugineum
Thhalv10004120m.g 5.0kb upstream 5.0kb upstream 6956 true scaffold_6: 6412949-6419904 Eutrema salsugineum
Thhalv10004120m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6412949-6417948 Eutrema salsugineum
Thhalv10004120m.g 5.0kb downstream 5.0kb downstream 6956 true scaffold_6: 6417949-6424904 Eutrema salsugineum
Thhalv10004120m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6419905-6424904 Eutrema salsugineum
Thhalv10004120m.g 10.0kb upstream 10.0kb upstream 11956 true scaffold_6: 6407949-6419904 Eutrema salsugineum
Thhalv10004120m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6407949-6417948 Eutrema salsugineum
Thhalv10004120m.g 10.0kb downstream 10.0kb downstream 11956 true scaffold_6: 6417949-6429904 Eutrema salsugineum
Thhalv10004120m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6419905-6429904 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366323 5261 Brassicaceae View MSA
123829804 5264 Brassicales-Malvales View MSA
124342748 5266 SBM View MSA
124252860 5268 Malvidae View MSA
124065317 5270 Rosid View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain