Gene : Thhalv10004300m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Genomic Order:  597
Name:  ? Thhalv10004300m.g Secondary Identifier:  ? PAC:20199038
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5980 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004300m.g 0.5kb upstream 0.5kb upstream 3256 true scaffold_6: 2331295-2334550 Eutrema salsugineum
Thhalv10004300m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2331295-2331794 Eutrema salsugineum
Thhalv10004300m.g 0.5kb downstream 0.5kb downstream 3256 true scaffold_6: 2331795-2335050 Eutrema salsugineum
Thhalv10004300m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2334551-2335050 Eutrema salsugineum
Thhalv10004300m.g 1.0kb upstream 1.0kb upstream 3756 true scaffold_6: 2330795-2334550 Eutrema salsugineum
Thhalv10004300m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2330795-2331794 Eutrema salsugineum
Thhalv10004300m.g 1.0kb downstream 1.0kb downstream 3756 true scaffold_6: 2331795-2335550 Eutrema salsugineum
Thhalv10004300m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2334551-2335550 Eutrema salsugineum
Thhalv10004300m.g 2.0kb upstream 2.0kb upstream 4756 true scaffold_6: 2329795-2334550 Eutrema salsugineum
Thhalv10004300m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2329795-2331794 Eutrema salsugineum
Thhalv10004300m.g 2.0kb downstream 2.0kb downstream 4756 true scaffold_6: 2331795-2336550 Eutrema salsugineum
Thhalv10004300m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2334551-2336550 Eutrema salsugineum
Thhalv10004300m.g 5.0kb upstream 5.0kb upstream 7756 true scaffold_6: 2326795-2334550 Eutrema salsugineum
Thhalv10004300m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2326795-2331794 Eutrema salsugineum
Thhalv10004300m.g 5.0kb downstream 5.0kb downstream 7756 true scaffold_6: 2331795-2339550 Eutrema salsugineum
Thhalv10004300m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2334551-2339550 Eutrema salsugineum
Thhalv10004300m.g 10.0kb upstream 10.0kb upstream 12756 true scaffold_6: 2321795-2334550 Eutrema salsugineum
Thhalv10004300m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2321795-2331794 Eutrema salsugineum
Thhalv10004300m.g 10.0kb downstream 10.0kb downstream 12756 true scaffold_6: 2331795-2344550 Eutrema salsugineum
Thhalv10004300m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2334551-2344550 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361554 5261 Brassicaceae View MSA
123831717 5264 Brassicales-Malvales View MSA
124343729 5266 SBM View MSA
124242312 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain