Gene : Thhalv10003971m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR13697:SF33 - 6-PHOSPHOFRUCTOKINASE 4, CHLOROPLASTIC Genomic Order:  621
Name:  ? Thhalv10003971m.g Secondary Identifier:  ? PAC:20199332
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ANAEROFRUCAT-PWY Eutrema salsugineum pathologic  
Esalsugineum ANAGLYCOLYSIS-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-1042 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10003971m.g 0.5kb upstream 0.5kb upstream 3293 true scaffold_6: 2409042-2412334 Eutrema salsugineum
Thhalv10003971m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2411835-2412334 Eutrema salsugineum
Thhalv10003971m.g 0.5kb downstream 0.5kb downstream 3293 true scaffold_6: 2408542-2411834 Eutrema salsugineum
Thhalv10003971m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2408542-2409041 Eutrema salsugineum
Thhalv10003971m.g 1.0kb upstream 1.0kb upstream 3793 true scaffold_6: 2409042-2412834 Eutrema salsugineum
Thhalv10003971m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2411835-2412834 Eutrema salsugineum
Thhalv10003971m.g 1.0kb downstream 1.0kb downstream 3793 true scaffold_6: 2408042-2411834 Eutrema salsugineum
Thhalv10003971m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2408042-2409041 Eutrema salsugineum
Thhalv10003971m.g 2.0kb upstream 2.0kb upstream 4793 true scaffold_6: 2409042-2413834 Eutrema salsugineum
Thhalv10003971m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2411835-2413834 Eutrema salsugineum
Thhalv10003971m.g 2.0kb downstream 2.0kb downstream 4793 true scaffold_6: 2407042-2411834 Eutrema salsugineum
Thhalv10003971m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2407042-2409041 Eutrema salsugineum
Thhalv10003971m.g 5.0kb upstream 5.0kb upstream 7793 true scaffold_6: 2409042-2416834 Eutrema salsugineum
Thhalv10003971m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2411835-2416834 Eutrema salsugineum
Thhalv10003971m.g 5.0kb downstream 5.0kb downstream 7793 true scaffold_6: 2404042-2411834 Eutrema salsugineum
Thhalv10003971m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2404042-2409041 Eutrema salsugineum
Thhalv10003971m.g 10.0kb upstream 10.0kb upstream 12793 true scaffold_6: 2409042-2421834 Eutrema salsugineum
Thhalv10003971m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2411835-2421834 Eutrema salsugineum
Thhalv10003971m.g 10.0kb downstream 10.0kb downstream 12793 true scaffold_6: 2399042-2411834 Eutrema salsugineum
Thhalv10003971m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2399042-2409041 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370968 5261 Brassicaceae View MSA
123827709 5264 Brassicales-Malvales View MSA
124346547 5266 SBM View MSA
124240678 5268 Malvidae View MSA
124067240 5270 Rosid View MSA
123738988 5271 Pentapetalae View MSA
122769940 5272 Eudicot View MSA
122042097 5273 Angiosperm View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain