Gene : Thhalv10004698m.g E. salsugineum v1.0
Defline:  (1 of 3) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  1751
Name:  ? Thhalv10004698m.g Secondary Identifier:  ? PAC:20198158
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-7511 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10004698m.g 0.5kb upstream 0.5kb upstream 3243 true scaffold_6: 7113506-7116748 Eutrema salsugineum
Thhalv10004698m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7113506-7114005 Eutrema salsugineum
Thhalv10004698m.g 0.5kb downstream 0.5kb downstream 3243 true scaffold_6: 7114006-7117248 Eutrema salsugineum
Thhalv10004698m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7116749-7117248 Eutrema salsugineum
Thhalv10004698m.g 1.0kb upstream 1.0kb upstream 3743 true scaffold_6: 7113006-7116748 Eutrema salsugineum
Thhalv10004698m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7113006-7114005 Eutrema salsugineum
Thhalv10004698m.g 1.0kb downstream 1.0kb downstream 3743 true scaffold_6: 7114006-7117748 Eutrema salsugineum
Thhalv10004698m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7116749-7117748 Eutrema salsugineum
Thhalv10004698m.g 2.0kb upstream 2.0kb upstream 4743 true scaffold_6: 7112006-7116748 Eutrema salsugineum
Thhalv10004698m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7112006-7114005 Eutrema salsugineum
Thhalv10004698m.g 2.0kb downstream 2.0kb downstream 4743 true scaffold_6: 7114006-7118748 Eutrema salsugineum
Thhalv10004698m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7116749-7118748 Eutrema salsugineum
Thhalv10004698m.g 5.0kb upstream 5.0kb upstream 7743 true scaffold_6: 7109006-7116748 Eutrema salsugineum
Thhalv10004698m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7109006-7114005 Eutrema salsugineum
Thhalv10004698m.g 5.0kb downstream 5.0kb downstream 7743 true scaffold_6: 7114006-7121748 Eutrema salsugineum
Thhalv10004698m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7116749-7121748 Eutrema salsugineum
Thhalv10004698m.g 10.0kb upstream 10.0kb upstream 12743 true scaffold_6: 7104006-7116748 Eutrema salsugineum
Thhalv10004698m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7104006-7114005 Eutrema salsugineum
Thhalv10004698m.g 10.0kb downstream 10.0kb downstream 12743 true scaffold_6: 7114006-7126748 Eutrema salsugineum
Thhalv10004698m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7116749-7126748 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366017 5261 Brassicaceae View MSA
123835799 5264 Brassicales-Malvales View MSA
124347139 5266 SBM View MSA
124251215 5268 Malvidae View MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain