Gene : Thhalv10005149m.g E. salsugineum v1.0

Defline:  (1 of 3) PTHR32227:SF60 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  1915
Name:  ? Thhalv10005149m.g Secondary Identifier:  ? PAC:20199834

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005149m.g 0.5kb upstream 0.5kb upstream 1264 true scaffold_6: 8828099-8829362 Eutrema salsugineum
Thhalv10005149m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8828099-8828598 Eutrema salsugineum
Thhalv10005149m.g 0.5kb downstream 0.5kb downstream 1264 true scaffold_6: 8828599-8829862 Eutrema salsugineum
Thhalv10005149m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8829363-8829862 Eutrema salsugineum
Thhalv10005149m.g 1.0kb upstream 1.0kb upstream 1764 true scaffold_6: 8827599-8829362 Eutrema salsugineum
Thhalv10005149m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8827599-8828598 Eutrema salsugineum
Thhalv10005149m.g 1.0kb downstream 1.0kb downstream 1764 true scaffold_6: 8828599-8830362 Eutrema salsugineum
Thhalv10005149m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8829363-8830362 Eutrema salsugineum
Thhalv10005149m.g 2.0kb upstream 2.0kb upstream 2764 true scaffold_6: 8826599-8829362 Eutrema salsugineum
Thhalv10005149m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8826599-8828598 Eutrema salsugineum
Thhalv10005149m.g 2.0kb downstream 2.0kb downstream 2764 true scaffold_6: 8828599-8831362 Eutrema salsugineum
Thhalv10005149m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8829363-8831362 Eutrema salsugineum
Thhalv10005149m.g 5.0kb upstream 5.0kb upstream 5764 true scaffold_6: 8823599-8829362 Eutrema salsugineum
Thhalv10005149m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8823599-8828598 Eutrema salsugineum
Thhalv10005149m.g 5.0kb downstream 5.0kb downstream 5764 true scaffold_6: 8828599-8834362 Eutrema salsugineum
Thhalv10005149m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8829363-8834362 Eutrema salsugineum
Thhalv10005149m.g 10.0kb upstream 10.0kb upstream 10764 true scaffold_6: 8818599-8829362 Eutrema salsugineum
Thhalv10005149m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8818599-8828598 Eutrema salsugineum
Thhalv10005149m.g 10.0kb downstream 10.0kb downstream 10764 true scaffold_6: 8828599-8839362 Eutrema salsugineum
Thhalv10005149m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8829363-8839362 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362630 5261 Brassicaceae View MSA
123831103 5264 Brassicales-Malvales View MSA
124339534 5266 SBM View MSA
124245445 5268 Malvidae View MSA
124064522 5270 Rosid View MSA
123739616 5271 Pentapetalae View MSA
122788531 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain