Gene : Thhalv10005416m.g E. salsugineum v1.0
Defline:  (1 of 136) PF00847 - AP2 domain (AP2) Genomic Order:  588
Name:  ? Thhalv10005416m.g Secondary Identifier:  ? PAC:20199879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005416m.g 0.5kb upstream 0.5kb upstream 1511 true scaffold_6: 2296912-2298422 Eutrema salsugineum
Thhalv10005416m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2296912-2297411 Eutrema salsugineum
Thhalv10005416m.g 0.5kb downstream 0.5kb downstream 1511 true scaffold_6: 2297412-2298922 Eutrema salsugineum
Thhalv10005416m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2298423-2298922 Eutrema salsugineum
Thhalv10005416m.g 1.0kb upstream 1.0kb upstream 2011 true scaffold_6: 2296412-2298422 Eutrema salsugineum
Thhalv10005416m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2296412-2297411 Eutrema salsugineum
Thhalv10005416m.g 1.0kb downstream 1.0kb downstream 2011 true scaffold_6: 2297412-2299422 Eutrema salsugineum
Thhalv10005416m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2298423-2299422 Eutrema salsugineum
Thhalv10005416m.g 2.0kb upstream 2.0kb upstream 3011 true scaffold_6: 2295412-2298422 Eutrema salsugineum
Thhalv10005416m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2295412-2297411 Eutrema salsugineum
Thhalv10005416m.g 2.0kb downstream 2.0kb downstream 3011 true scaffold_6: 2297412-2300422 Eutrema salsugineum
Thhalv10005416m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2298423-2300422 Eutrema salsugineum
Thhalv10005416m.g 5.0kb upstream 5.0kb upstream 6011 true scaffold_6: 2292412-2298422 Eutrema salsugineum
Thhalv10005416m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2292412-2297411 Eutrema salsugineum
Thhalv10005416m.g 5.0kb downstream 5.0kb downstream 6011 true scaffold_6: 2297412-2303422 Eutrema salsugineum
Thhalv10005416m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2298423-2303422 Eutrema salsugineum
Thhalv10005416m.g 10.0kb upstream 10.0kb upstream 11011 true scaffold_6: 2287412-2298422 Eutrema salsugineum
Thhalv10005416m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2287412-2297411 Eutrema salsugineum
Thhalv10005416m.g 10.0kb downstream 10.0kb downstream 11011 true scaffold_6: 2297412-2308422 Eutrema salsugineum
Thhalv10005416m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2298423-2308422 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360853 5261 Brassicaceae View MSA
123835494 5264 Brassicales-Malvales View MSA
124336860 5266 SBM View MSA
124250788 5268 Malvidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain