Protein Family : Integrase-type DNA-binding superfamily protein 124336860

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  21

21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g036963m.g (1 of 119) PF00847 - AP2 domain (AP2) C. sinensis v1.1 585   scaffold00187: 75271-75855
AT5G07310 (1 of 141) PF00847 - AP2 domain (AP2) A. thaliana TAIR10 977   Chr5: 2305684-2306660
AT5G61890 (1 of 141) PF00847 - AP2 domain (AP2) A. thaliana TAIR10 1272   Chr5: 24852639-24853910
Thhalv10015583m.g (1 of 136) PF00847 - AP2 domain (AP2) E. salsugineum v1.0 1004   scaffold_2: 2301536-2302539
Thhalv10005416m.g (1 of 136) PF00847 - AP2 domain (AP2) E. salsugineum v1.0 1011   scaffold_6: 2297412-2298422
Ciclev10032575m.g (1 of 128) PF00847 - AP2 domain (AP2) C. clementina v1.0 1428   scaffold_4: 14113372-14114799
Gorai.008G210600 (1 of 258) PF00847 - AP2 domain (AP2) G. raimondii v2.1 1839   Chr08: 49669154-49670992
Thecc1EG014762 (1 of 119) PF00847 - AP2 domain (AP2) T. cacao v1.1 2637   scaffold_3: 24362620-24365256
Araha.2124s0003 (1 of 86) PF00847 - AP2 domain (AP2) A. halleri v1.1 1094   Scaffold2124: 6359-7452
Araha.9375s0009 (1 of 86) PF00847 - AP2 domain (AP2) A. halleri v1.1 1426   Scaffold9375: 24447-25872
Cagra.2662s0009 (1 of 132) PF00847 - AP2 domain (AP2) C. grandiflora v1.1 981   Scaffold2662: 34494-35474
Cagra.4553s0019 (1 of 132) PF00847 - AP2 domain (AP2) C. grandiflora v1.1 1464   Scaffold4553: 93106-94569
Brara.B03778 (1 of 279) PF00847 - AP2 domain (AP2) B. rapa FPsc v1.3 1327   A02: 31159010-31160336
Brara.C00289 (1 of 279) PF00847 - AP2 domain (AP2) B. rapa FPsc v1.3 990   A03: 1382842-1383831
Brara.J02507 (1 of 279) PF00847 - AP2 domain (AP2) B. rapa FPsc v1.3 1087   A10: 18005956-18007042
Bostr.13129s0235 (1 of 143) PF00847 - AP2 domain (AP2) B. stricta v1.2 1189   Scaffold13129: 1069118-1070306
Bostr.26833s0047 (1 of 143) PF00847 - AP2 domain (AP2) B. stricta v1.2 1446   Scaffold26833: 296415-297860
AL6G17550 (1 of 151) PF00847 - AP2 domain (AP2) A. lyrata v2.1 1358   scaffold_6: 2838820-2840177
AL8G38650 (1 of 151) PF00847 - AP2 domain (AP2) A. lyrata v2.1 1477   scaffold_8: 20217318-20218794
Carub.0008s2257 (1 of 146) PF00847 - AP2 domain (AP2) C. rubella v1.1 1672   scaffold_8: 11134200-11135871
Carub.0006s0627 (1 of 146) PF00847 - AP2 domain (AP2) C. rubella v1.1 1013   scaffold_6: 2302780-2303792

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AL6G17550.t1 A. lyrata v2.1 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Carub.0008s2257.1.p C. rubella v1.1 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
orange1.1g036963m C. sinensis v1.1 124336860 Integrase-type DNA-binding superfamily protein 1 5266 SBM
AT5G07310.1 A. thaliana TAIR10 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
AT5G61890.1 A. thaliana TAIR10 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Thhalv10015583m E. salsugineum v1.0 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Thhalv10005416m E. salsugineum v1.0 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Ciclev10032575m C. clementina v1.0 124336860 Integrase-type DNA-binding superfamily protein 1 5266 SBM
Gorai.008G210600.1 G. raimondii v2.1 124336860 Integrase-type DNA-binding superfamily protein 1 5266 SBM
Thecc1EG014762t1 T. cacao v1.1 124336860 Integrase-type DNA-binding superfamily protein 1 5266 SBM
Araha.9375s0009.1.p A. halleri v1.1 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Araha.2124s0003.1.p A. halleri v1.1 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Cagra.2662s0009.1.p C. grandiflora v1.1 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Cagra.4553s0019.1.p C. grandiflora v1.1 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Brara.B03778.1.p B. rapa FPsc v1.3 124336860 Integrase-type DNA-binding superfamily protein 3 5266 SBM
Brara.C00289.1.p B. rapa FPsc v1.3 124336860 Integrase-type DNA-binding superfamily protein 3 5266 SBM
Brara.J02507.1.p B. rapa FPsc v1.3 124336860 Integrase-type DNA-binding superfamily protein 3 5266 SBM
Bostr.26833s0047.1.p B. stricta v1.2 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Bostr.13129s0235.1.p B. stricta v1.2 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
AL8G38650.t1 A. lyrata v2.1 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM
Carub.0006s0627.1.p C. rubella v1.1 124336860 Integrase-type DNA-binding superfamily protein 2 5266 SBM