Gene : Carub.0008s2257 C. rubella v1.1
Defline:  (1 of 146) PF00847 - AP2 domain (AP2) Genomic Order:  2257
Name:  ? Carub.0008s2257 Secondary Identifier:  ? PAC:39250429
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s2257 0.5kb upstream 0.5kb upstream 2172 true scaffold_8: 11134200-11136371 Capsella rubella
Carub.0008s2257 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 11135872-11136371 Capsella rubella
Carub.0008s2257 0.5kb downstream 0.5kb downstream 2172 true scaffold_8: 11133700-11135871 Capsella rubella
Carub.0008s2257 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 11133700-11134199 Capsella rubella
Carub.0008s2257 1.0kb upstream 1.0kb upstream 2672 true scaffold_8: 11134200-11136871 Capsella rubella
Carub.0008s2257 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 11135872-11136871 Capsella rubella
Carub.0008s2257 1.0kb downstream 1.0kb downstream 2672 true scaffold_8: 11133200-11135871 Capsella rubella
Carub.0008s2257 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 11133200-11134199 Capsella rubella
Carub.0008s2257 2.0kb upstream 2.0kb upstream 3672 true scaffold_8: 11134200-11137871 Capsella rubella
Carub.0008s2257 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 11135872-11137871 Capsella rubella
Carub.0008s2257 2.0kb downstream 2.0kb downstream 3672 true scaffold_8: 11132200-11135871 Capsella rubella
Carub.0008s2257 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 11132200-11134199 Capsella rubella
Carub.0008s2257 5.0kb upstream 5.0kb upstream 6672 true scaffold_8: 11134200-11140871 Capsella rubella
Carub.0008s2257 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 11135872-11140871 Capsella rubella
Carub.0008s2257 5.0kb downstream 5.0kb downstream 6672 true scaffold_8: 11129200-11135871 Capsella rubella
Carub.0008s2257 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 11129200-11134199 Capsella rubella
Carub.0008s2257 10.0kb upstream 10.0kb upstream 11672 true scaffold_8: 11134200-11145871 Capsella rubella
Carub.0008s2257 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11135872-11145871 Capsella rubella
Carub.0008s2257 10.0kb downstream 10.0kb downstream 11672 true scaffold_8: 11124200-11135871 Capsella rubella
Carub.0008s2257 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 11124200-11134199 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360853 5261 Brassicaceae View MSA
123835494 5264 Brassicales-Malvales View MSA
124336860 5266 SBM View MSA
124250788 5268 Malvidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain