Gene : Carub.0006s0627 C. rubella v1.1
Defline:  (1 of 146) PF00847 - AP2 domain (AP2) Genomic Order:  627
Name:  ? Carub.0006s0627 Secondary Identifier:  ? PAC:39248059
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0627 0.5kb upstream 0.5kb upstream 1513 true scaffold_6: 2302280-2303792 Capsella rubella
Carub.0006s0627 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2302280-2302779 Capsella rubella
Carub.0006s0627 0.5kb downstream 0.5kb downstream 1513 true scaffold_6: 2302780-2304292 Capsella rubella
Carub.0006s0627 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2303793-2304292 Capsella rubella
Carub.0006s0627 1.0kb upstream 1.0kb upstream 2013 true scaffold_6: 2301780-2303792 Capsella rubella
Carub.0006s0627 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2301780-2302779 Capsella rubella
Carub.0006s0627 1.0kb downstream 1.0kb downstream 2013 true scaffold_6: 2302780-2304792 Capsella rubella
Carub.0006s0627 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2303793-2304792 Capsella rubella
Carub.0006s0627 2.0kb upstream 2.0kb upstream 3013 true scaffold_6: 2300780-2303792 Capsella rubella
Carub.0006s0627 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2300780-2302779 Capsella rubella
Carub.0006s0627 2.0kb downstream 2.0kb downstream 3013 true scaffold_6: 2302780-2305792 Capsella rubella
Carub.0006s0627 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2303793-2305792 Capsella rubella
Carub.0006s0627 5.0kb upstream 5.0kb upstream 6013 true scaffold_6: 2297780-2303792 Capsella rubella
Carub.0006s0627 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2297780-2302779 Capsella rubella
Carub.0006s0627 5.0kb downstream 5.0kb downstream 6013 true scaffold_6: 2302780-2308792 Capsella rubella
Carub.0006s0627 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2303793-2308792 Capsella rubella
Carub.0006s0627 10.0kb upstream 10.0kb upstream 11013 true scaffold_6: 2292780-2303792 Capsella rubella
Carub.0006s0627 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2292780-2302779 Capsella rubella
Carub.0006s0627 10.0kb downstream 10.0kb downstream 11013 true scaffold_6: 2302780-2313792 Capsella rubella
Carub.0006s0627 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2303793-2313792 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374771 5261 Brassicaceae View MSA
123835494 5264 Brassicales-Malvales View MSA
124336860 5266 SBM View MSA
124250788 5268 Malvidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain