Gene : Cagra.2662s0009 C. grandiflora v1.1
Defline:  (1 of 132) PF00847 - AP2 domain (AP2) Genomic Order:  9
Name:  ? Cagra.2662s0009 Secondary Identifier:  ? PAC:28900691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2662s0009 0.5kb upstream 0.5kb upstream 1481 true Scaffold2662: 33994-35474 Capsella grandiflora
Cagra.2662s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2662: 33994-34493 Capsella grandiflora
Cagra.2662s0009 0.5kb downstream 0.5kb downstream 1481 true Scaffold2662: 34494-35974 Capsella grandiflora
Cagra.2662s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2662: 35475-35974 Capsella grandiflora
Cagra.2662s0009 1.0kb upstream 1.0kb upstream 1981 true Scaffold2662: 33494-35474 Capsella grandiflora
Cagra.2662s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2662: 33494-34493 Capsella grandiflora
Cagra.2662s0009 1.0kb downstream 1.0kb downstream 1981 true Scaffold2662: 34494-36474 Capsella grandiflora
Cagra.2662s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2662: 35475-36474 Capsella grandiflora
Cagra.2662s0009 2.0kb upstream 2.0kb upstream 2981 true Scaffold2662: 32494-35474 Capsella grandiflora
Cagra.2662s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2662: 32494-34493 Capsella grandiflora
Cagra.2662s0009 2.0kb downstream 2.0kb downstream 2981 true Scaffold2662: 34494-37474 Capsella grandiflora
Cagra.2662s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2662: 35475-37474 Capsella grandiflora
Cagra.2662s0009 5.0kb upstream 5.0kb upstream 5981 true Scaffold2662: 29494-35474 Capsella grandiflora
Cagra.2662s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2662: 29494-34493 Capsella grandiflora
Cagra.2662s0009 5.0kb downstream 5.0kb downstream 5981 true Scaffold2662: 34494-40474 Capsella grandiflora
Cagra.2662s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2662: 35475-40474 Capsella grandiflora
Cagra.2662s0009 10.0kb upstream 10.0kb upstream 10981 true Scaffold2662: 24494-35474 Capsella grandiflora
Cagra.2662s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2662: 24494-34493 Capsella grandiflora
Cagra.2662s0009 10.0kb downstream 10.0kb downstream 10981 true Scaffold2662: 34494-45474 Capsella grandiflora
Cagra.2662s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2662: 35475-45474 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374771 5261 Brassicaceae View MSA
123835494 5264 Brassicales-Malvales View MSA
124336860 5266 SBM View MSA
124250788 5268 Malvidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain