Gene : Thhalv10005495m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11921:SF23 - SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT 3, MITOCHONDRIAL Genomic Order:  252
Name:  ? Thhalv10005495m.g Secondary Identifier:  ? PAC:20199915
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-3781 Eutrema salsugineum pathologic  
Esalsugineum PWY-4302 Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  
Esalsugineum PWY-7279 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10005495m.g 0.5kb upstream 0.5kb upstream 2318 true scaffold_6: 981388-983705 Eutrema salsugineum
Thhalv10005495m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 981388-981887 Eutrema salsugineum
Thhalv10005495m.g 0.5kb downstream 0.5kb downstream 2318 true scaffold_6: 981888-984205 Eutrema salsugineum
Thhalv10005495m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 983706-984205 Eutrema salsugineum
Thhalv10005495m.g 1.0kb upstream 1.0kb upstream 2818 true scaffold_6: 980888-983705 Eutrema salsugineum
Thhalv10005495m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 980888-981887 Eutrema salsugineum
Thhalv10005495m.g 1.0kb downstream 1.0kb downstream 2818 true scaffold_6: 981888-984705 Eutrema salsugineum
Thhalv10005495m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 983706-984705 Eutrema salsugineum
Thhalv10005495m.g 2.0kb upstream 2.0kb upstream 3818 true scaffold_6: 979888-983705 Eutrema salsugineum
Thhalv10005495m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 979888-981887 Eutrema salsugineum
Thhalv10005495m.g 2.0kb downstream 2.0kb downstream 3818 true scaffold_6: 981888-985705 Eutrema salsugineum
Thhalv10005495m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 983706-985705 Eutrema salsugineum
Thhalv10005495m.g 5.0kb upstream 5.0kb upstream 6818 true scaffold_6: 976888-983705 Eutrema salsugineum
Thhalv10005495m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 976888-981887 Eutrema salsugineum
Thhalv10005495m.g 5.0kb downstream 5.0kb downstream 6818 true scaffold_6: 981888-988705 Eutrema salsugineum
Thhalv10005495m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 983706-988705 Eutrema salsugineum
Thhalv10005495m.g 10.0kb upstream 10.0kb upstream 11818 true scaffold_6: 971888-983705 Eutrema salsugineum
Thhalv10005495m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 971888-981887 Eutrema salsugineum
Thhalv10005495m.g 10.0kb downstream 10.0kb downstream 11818 true scaffold_6: 981888-993705 Eutrema salsugineum
Thhalv10005495m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 983706-993705 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360845 5261 Brassicaceae View MSA
123831796 5264 Brassicales-Malvales View MSA
124343953 5266 SBM View MSA
124244083 5268 Malvidae View MSA
124072619 5270 Rosid View MSA
123748072 5271 Pentapetalae View MSA
122787884 5272 Eudicot View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain