Gene : Thhalv10011370m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR31403:SF6 - PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC Genomic Order:  440
Name:  ? Thhalv10011370m.g Secondary Identifier:  ? PAC:20184224
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum LIPAS-PWY Eutrema salsugineum pathologic  
Esalsugineum LIPASYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-6803 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011370m.g 0.5kb upstream 0.5kb upstream 2163 true scaffold_7: 2388706-2390868 Eutrema salsugineum
Thhalv10011370m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 2390369-2390868 Eutrema salsugineum
Thhalv10011370m.g 0.5kb downstream 0.5kb downstream 2163 true scaffold_7: 2388206-2390368 Eutrema salsugineum
Thhalv10011370m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 2388206-2388705 Eutrema salsugineum
Thhalv10011370m.g 1.0kb upstream 1.0kb upstream 2663 true scaffold_7: 2388706-2391368 Eutrema salsugineum
Thhalv10011370m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 2390369-2391368 Eutrema salsugineum
Thhalv10011370m.g 1.0kb downstream 1.0kb downstream 2663 true scaffold_7: 2387706-2390368 Eutrema salsugineum
Thhalv10011370m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 2387706-2388705 Eutrema salsugineum
Thhalv10011370m.g 2.0kb upstream 2.0kb upstream 3663 true scaffold_7: 2388706-2392368 Eutrema salsugineum
Thhalv10011370m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 2390369-2392368 Eutrema salsugineum
Thhalv10011370m.g 2.0kb downstream 2.0kb downstream 3663 true scaffold_7: 2386706-2390368 Eutrema salsugineum
Thhalv10011370m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 2386706-2388705 Eutrema salsugineum
Thhalv10011370m.g 5.0kb upstream 5.0kb upstream 6663 true scaffold_7: 2388706-2395368 Eutrema salsugineum
Thhalv10011370m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 2390369-2395368 Eutrema salsugineum
Thhalv10011370m.g 5.0kb downstream 5.0kb downstream 6663 true scaffold_7: 2383706-2390368 Eutrema salsugineum
Thhalv10011370m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 2383706-2388705 Eutrema salsugineum
Thhalv10011370m.g 10.0kb upstream 10.0kb upstream 11663 true scaffold_7: 2388706-2400368 Eutrema salsugineum
Thhalv10011370m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 2390369-2400368 Eutrema salsugineum
Thhalv10011370m.g 10.0kb downstream 10.0kb downstream 11663 true scaffold_7: 2378706-2390368 Eutrema salsugineum
Thhalv10011370m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 2378706-2388705 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372196 5261 Brassicaceae View MSA
123831765 5264 Brassicales-Malvales View MSA
124341811 5266 SBM View MSA
124244577 5268 Malvidae View MSA
124070138 5270 Rosid View MSA
123750987 5271 Pentapetalae View MSA
122791980 5272 Eudicot View MSA
122045871 5273 Angiosperm View MSA
121350475 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain