Gene : Thhalv10011454m.g E. salsugineum v1.0

Defline:  (1 of 10) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  221
Name:  ? Thhalv10011454m.g Secondary Identifier:  ? PAC:20184566

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011454m.g 0.5kb upstream 0.5kb upstream 2007 true scaffold_7: 1131693-1133699 Eutrema salsugineum
Thhalv10011454m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1133200-1133699 Eutrema salsugineum
Thhalv10011454m.g 0.5kb downstream 0.5kb downstream 2007 true scaffold_7: 1131193-1133199 Eutrema salsugineum
Thhalv10011454m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1131193-1131692 Eutrema salsugineum
Thhalv10011454m.g 1.0kb upstream 1.0kb upstream 2507 true scaffold_7: 1131693-1134199 Eutrema salsugineum
Thhalv10011454m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1133200-1134199 Eutrema salsugineum
Thhalv10011454m.g 1.0kb downstream 1.0kb downstream 2507 true scaffold_7: 1130693-1133199 Eutrema salsugineum
Thhalv10011454m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1130693-1131692 Eutrema salsugineum
Thhalv10011454m.g 2.0kb upstream 2.0kb upstream 3507 true scaffold_7: 1131693-1135199 Eutrema salsugineum
Thhalv10011454m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1133200-1135199 Eutrema salsugineum
Thhalv10011454m.g 2.0kb downstream 2.0kb downstream 3507 true scaffold_7: 1129693-1133199 Eutrema salsugineum
Thhalv10011454m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1129693-1131692 Eutrema salsugineum
Thhalv10011454m.g 5.0kb upstream 5.0kb upstream 6507 true scaffold_7: 1131693-1138199 Eutrema salsugineum
Thhalv10011454m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1133200-1138199 Eutrema salsugineum
Thhalv10011454m.g 5.0kb downstream 5.0kb downstream 6507 true scaffold_7: 1126693-1133199 Eutrema salsugineum
Thhalv10011454m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1126693-1131692 Eutrema salsugineum
Thhalv10011454m.g 10.0kb upstream 10.0kb upstream 11507 true scaffold_7: 1131693-1143199 Eutrema salsugineum
Thhalv10011454m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1133200-1143199 Eutrema salsugineum
Thhalv10011454m.g 10.0kb downstream 10.0kb downstream 11507 true scaffold_7: 1121693-1133199 Eutrema salsugineum
Thhalv10011454m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1121693-1131692 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365667 5261 Brassicaceae View MSA
123831362 5264 Brassicales-Malvales View MSA
124345185 5266 SBM View MSA
124240823 5268 Malvidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain