Gene : Thhalv10012206m.g E. salsugineum v1.0
Defline:  (1 of 8) PTHR24015:SF644 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  986
Name:  ? Thhalv10012206m.g Secondary Identifier:  ? PAC:20184598
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012206m.g 0.5kb upstream 0.5kb upstream 3815 true scaffold_7: 9536776-9540590 Eutrema salsugineum
Thhalv10012206m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9536776-9537275 Eutrema salsugineum
Thhalv10012206m.g 0.5kb downstream 0.5kb downstream 3815 true scaffold_7: 9537276-9541090 Eutrema salsugineum
Thhalv10012206m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9540591-9541090 Eutrema salsugineum
Thhalv10012206m.g 1.0kb upstream 1.0kb upstream 4315 true scaffold_7: 9536276-9540590 Eutrema salsugineum
Thhalv10012206m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9536276-9537275 Eutrema salsugineum
Thhalv10012206m.g 1.0kb downstream 1.0kb downstream 4315 true scaffold_7: 9537276-9541590 Eutrema salsugineum
Thhalv10012206m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9540591-9541590 Eutrema salsugineum
Thhalv10012206m.g 2.0kb upstream 2.0kb upstream 5315 true scaffold_7: 9535276-9540590 Eutrema salsugineum
Thhalv10012206m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9535276-9537275 Eutrema salsugineum
Thhalv10012206m.g 2.0kb downstream 2.0kb downstream 5315 true scaffold_7: 9537276-9542590 Eutrema salsugineum
Thhalv10012206m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9540591-9542590 Eutrema salsugineum
Thhalv10012206m.g 5.0kb upstream 5.0kb upstream 8315 true scaffold_7: 9532276-9540590 Eutrema salsugineum
Thhalv10012206m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9532276-9537275 Eutrema salsugineum
Thhalv10012206m.g 5.0kb downstream 5.0kb downstream 8315 true scaffold_7: 9537276-9545590 Eutrema salsugineum
Thhalv10012206m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9540591-9545590 Eutrema salsugineum
Thhalv10012206m.g 10.0kb upstream 10.0kb upstream 13315 true scaffold_7: 9527276-9540590 Eutrema salsugineum
Thhalv10012206m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9527276-9537275 Eutrema salsugineum
Thhalv10012206m.g 10.0kb downstream 10.0kb downstream 13315 true scaffold_7: 9537276-9550590 Eutrema salsugineum
Thhalv10012206m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9540591-9550590 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121509650 5273 Angiosperm Singleton cluster - no MSA
122359149 5261 Brassicaceae Singleton cluster - no MSA
123797044 5264 Brassicales-Malvales Singleton cluster - no MSA
124294773 5266 SBM Singleton cluster - no MSA
124147271 5268 Malvidae Singleton cluster - no MSA
123873470 5270 Rosid Singleton cluster - no MSA
123457544 5271 Pentapetalae Singleton cluster - no MSA
122492960 5272 Eudicot Singleton cluster - no MSA
120782775 5274 Embryophyte Singleton cluster - no MSA
122824813 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain