Gene : Thhalv10012314m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR10145 - TRANSCRIPTION ELONGATION FACTOR SPT6 Genomic Order:  2
Name:  ? Thhalv10012314m.g Secondary Identifier:  ? PAC:20184397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012314m.g 0.5kb upstream 0.5kb upstream 6824 true scaffold_7: 10727-17550 Eutrema salsugineum
Thhalv10012314m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 17051-17550 Eutrema salsugineum
Thhalv10012314m.g 0.5kb downstream 0.5kb downstream 6824 true scaffold_7: 10227-17050 Eutrema salsugineum
Thhalv10012314m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 10227-10726 Eutrema salsugineum
Thhalv10012314m.g 1.0kb upstream 1.0kb upstream 7324 true scaffold_7: 10727-18050 Eutrema salsugineum
Thhalv10012314m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 17051-18050 Eutrema salsugineum
Thhalv10012314m.g 1.0kb downstream 1.0kb downstream 7324 true scaffold_7: 9727-17050 Eutrema salsugineum
Thhalv10012314m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9727-10726 Eutrema salsugineum
Thhalv10012314m.g 2.0kb upstream 2.0kb upstream 8324 true scaffold_7: 10727-19050 Eutrema salsugineum
Thhalv10012314m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 17051-19050 Eutrema salsugineum
Thhalv10012314m.g 2.0kb downstream 2.0kb downstream 8324 true scaffold_7: 8727-17050 Eutrema salsugineum
Thhalv10012314m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 8727-10726 Eutrema salsugineum
Thhalv10012314m.g 5.0kb upstream 5.0kb upstream 11324 true scaffold_7: 10727-22050 Eutrema salsugineum
Thhalv10012314m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 17051-22050 Eutrema salsugineum
Thhalv10012314m.g 5.0kb downstream 5.0kb downstream 11324 true scaffold_7: 5727-17050 Eutrema salsugineum
Thhalv10012314m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5727-10726 Eutrema salsugineum
Thhalv10012314m.g 10.0kb upstream 10.0kb upstream 16324 true scaffold_7: 10727-27050 Eutrema salsugineum
Thhalv10012314m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 17051-27050 Eutrema salsugineum
Thhalv10012314m.g 10.0kb downstream 10.0kb downstream 16324 true scaffold_7: 727-17050 Eutrema salsugineum
Thhalv10012314m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 727-10726 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121509631 5273 Angiosperm Singleton cluster - no MSA
122359119 5261 Brassicaceae Singleton cluster - no MSA
123797017 5264 Brassicales-Malvales Singleton cluster - no MSA
124294746 5266 SBM Singleton cluster - no MSA
124147247 5268 Malvidae Singleton cluster - no MSA
123873449 5270 Rosid Singleton cluster - no MSA
123457525 5271 Pentapetalae Singleton cluster - no MSA
122492941 5272 Eudicot Singleton cluster - no MSA
120782756 5274 Embryophyte Singleton cluster - no MSA
123426736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain