Gene : Thhalv10023976m.g E. salsugineum v1.0

Defline:  (1 of 13) PTHR24015:SF884 - PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN Genomic Order:  197
Name:  ? Thhalv10023976m.g Secondary Identifier:  ? PAC:20201168

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023976m.g 0.5kb upstream 0.5kb upstream 2501 true scaffold_8: 1355871-1358371 Eutrema salsugineum
Thhalv10023976m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1357872-1358371 Eutrema salsugineum
Thhalv10023976m.g 0.5kb downstream 0.5kb downstream 2501 true scaffold_8: 1355371-1357871 Eutrema salsugineum
Thhalv10023976m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1355371-1355870 Eutrema salsugineum
Thhalv10023976m.g 1.0kb upstream 1.0kb upstream 3001 true scaffold_8: 1355871-1358871 Eutrema salsugineum
Thhalv10023976m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1357872-1358871 Eutrema salsugineum
Thhalv10023976m.g 1.0kb downstream 1.0kb downstream 3001 true scaffold_8: 1354871-1357871 Eutrema salsugineum
Thhalv10023976m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1354871-1355870 Eutrema salsugineum
Thhalv10023976m.g 2.0kb upstream 2.0kb upstream 4001 true scaffold_8: 1355871-1359871 Eutrema salsugineum
Thhalv10023976m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1357872-1359871 Eutrema salsugineum
Thhalv10023976m.g 2.0kb downstream 2.0kb downstream 4001 true scaffold_8: 1353871-1357871 Eutrema salsugineum
Thhalv10023976m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1353871-1355870 Eutrema salsugineum
Thhalv10023976m.g 5.0kb upstream 5.0kb upstream 7001 true scaffold_8: 1355871-1362871 Eutrema salsugineum
Thhalv10023976m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1357872-1362871 Eutrema salsugineum
Thhalv10023976m.g 5.0kb downstream 5.0kb downstream 7001 true scaffold_8: 1350871-1357871 Eutrema salsugineum
Thhalv10023976m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1350871-1355870 Eutrema salsugineum
Thhalv10023976m.g 10.0kb upstream 10.0kb upstream 12001 true scaffold_8: 1355871-1367871 Eutrema salsugineum
Thhalv10023976m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1357872-1367871 Eutrema salsugineum
Thhalv10023976m.g 10.0kb downstream 10.0kb downstream 12001 true scaffold_8: 1345871-1357871 Eutrema salsugineum
Thhalv10023976m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1345871-1355870 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378647 5261 Brassicaceae View MSA
123841436 5264 Brassicales-Malvales View MSA
124350672 5266 SBM View MSA
124254642 5268 Malvidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain