Gene : Thhalv10023906m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Genomic Order:  746
Name:  ? Thhalv10023906m.g Secondary Identifier:  ? PAC:20201010
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1081 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10023906m.g 0.5kb upstream 0.5kb upstream 2590 true scaffold_8: 8284933-8287522 Eutrema salsugineum
Thhalv10023906m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 8284933-8285432 Eutrema salsugineum
Thhalv10023906m.g 0.5kb downstream 0.5kb downstream 2590 true scaffold_8: 8285433-8288022 Eutrema salsugineum
Thhalv10023906m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 8287523-8288022 Eutrema salsugineum
Thhalv10023906m.g 1.0kb upstream 1.0kb upstream 3090 true scaffold_8: 8284433-8287522 Eutrema salsugineum
Thhalv10023906m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 8284433-8285432 Eutrema salsugineum
Thhalv10023906m.g 1.0kb downstream 1.0kb downstream 3090 true scaffold_8: 8285433-8288522 Eutrema salsugineum
Thhalv10023906m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 8287523-8288522 Eutrema salsugineum
Thhalv10023906m.g 2.0kb upstream 2.0kb upstream 4090 true scaffold_8: 8283433-8287522 Eutrema salsugineum
Thhalv10023906m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 8283433-8285432 Eutrema salsugineum
Thhalv10023906m.g 2.0kb downstream 2.0kb downstream 4090 true scaffold_8: 8285433-8289522 Eutrema salsugineum
Thhalv10023906m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 8287523-8289522 Eutrema salsugineum
Thhalv10023906m.g 5.0kb upstream 5.0kb upstream 7090 true scaffold_8: 8280433-8287522 Eutrema salsugineum
Thhalv10023906m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 8280433-8285432 Eutrema salsugineum
Thhalv10023906m.g 5.0kb downstream 5.0kb downstream 7090 true scaffold_8: 8285433-8292522 Eutrema salsugineum
Thhalv10023906m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 8287523-8292522 Eutrema salsugineum
Thhalv10023906m.g 10.0kb upstream 10.0kb upstream 12090 true scaffold_8: 8275433-8287522 Eutrema salsugineum
Thhalv10023906m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 8275433-8285432 Eutrema salsugineum
Thhalv10023906m.g 10.0kb downstream 10.0kb downstream 12090 true scaffold_8: 8285433-8297522 Eutrema salsugineum
Thhalv10023906m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 8287523-8297522 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363483 5261 Brassicaceae View MSA
123840390 5264 Brassicales-Malvales View MSA
124322712 5266 SBM View MSA
124250647 5268 Malvidae View MSA
124071309 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain