Gene : Thhalv10018328m.g E. salsugineum v1.0
Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  1001
Name:  ? Thhalv10018328m.g Secondary Identifier:  ? PAC:20192091
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLUCOSE1PMETAB-PWY Eutrema salsugineum pathologic  
Esalsugineum GLYCOGENSYNTH-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3801 Eutrema salsugineum pathologic  
Esalsugineum PWY-622 Eutrema salsugineum pathologic  
Esalsugineum PWY66-422 Eutrema salsugineum pathologic  
Esalsugineum PWY-7238 Eutrema salsugineum pathologic  
Esalsugineum PWY-7343 Eutrema salsugineum pathologic  
Esalsugineum SUCSYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018328m.g 0.5kb upstream 0.5kb upstream 5060 true scaffold_9: 4300189-4305248 Eutrema salsugineum
Thhalv10018328m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4300189-4300688 Eutrema salsugineum
Thhalv10018328m.g 0.5kb downstream 0.5kb downstream 5060 true scaffold_9: 4300689-4305748 Eutrema salsugineum
Thhalv10018328m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4305249-4305748 Eutrema salsugineum
Thhalv10018328m.g 1.0kb upstream 1.0kb upstream 5560 true scaffold_9: 4299689-4305248 Eutrema salsugineum
Thhalv10018328m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4299689-4300688 Eutrema salsugineum
Thhalv10018328m.g 1.0kb downstream 1.0kb downstream 5560 true scaffold_9: 4300689-4306248 Eutrema salsugineum
Thhalv10018328m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4305249-4306248 Eutrema salsugineum
Thhalv10018328m.g 2.0kb upstream 2.0kb upstream 6560 true scaffold_9: 4298689-4305248 Eutrema salsugineum
Thhalv10018328m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4298689-4300688 Eutrema salsugineum
Thhalv10018328m.g 2.0kb downstream 2.0kb downstream 6560 true scaffold_9: 4300689-4307248 Eutrema salsugineum
Thhalv10018328m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4305249-4307248 Eutrema salsugineum
Thhalv10018328m.g 5.0kb upstream 5.0kb upstream 9560 true scaffold_9: 4295689-4305248 Eutrema salsugineum
Thhalv10018328m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4295689-4300688 Eutrema salsugineum
Thhalv10018328m.g 5.0kb downstream 5.0kb downstream 9560 true scaffold_9: 4300689-4310248 Eutrema salsugineum
Thhalv10018328m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4305249-4310248 Eutrema salsugineum
Thhalv10018328m.g 10.0kb upstream 10.0kb upstream 14560 true scaffold_9: 4290689-4305248 Eutrema salsugineum
Thhalv10018328m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4290689-4300688 Eutrema salsugineum
Thhalv10018328m.g 10.0kb downstream 10.0kb downstream 14560 true scaffold_9: 4300689-4315248 Eutrema salsugineum
Thhalv10018328m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4305249-4315248 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376242 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain