Gene : Thhalv10018768m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  1668
Name:  ? Thhalv10018768m.g Secondary Identifier:  ? PAC:20191067
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-1422 Eutrema salsugineum pathologic  
Esalsugineum PWY-7436 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018768m.g 0.5kb upstream 0.5kb upstream 3460 true scaffold_9: 12353622-12357081 Eutrema salsugineum
Thhalv10018768m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 12356582-12357081 Eutrema salsugineum
Thhalv10018768m.g 0.5kb downstream 0.5kb downstream 3460 true scaffold_9: 12353122-12356581 Eutrema salsugineum
Thhalv10018768m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 12353122-12353621 Eutrema salsugineum
Thhalv10018768m.g 1.0kb upstream 1.0kb upstream 3960 true scaffold_9: 12353622-12357581 Eutrema salsugineum
Thhalv10018768m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 12356582-12357581 Eutrema salsugineum
Thhalv10018768m.g 1.0kb downstream 1.0kb downstream 3960 true scaffold_9: 12352622-12356581 Eutrema salsugineum
Thhalv10018768m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 12352622-12353621 Eutrema salsugineum
Thhalv10018768m.g 2.0kb upstream 2.0kb upstream 4960 true scaffold_9: 12353622-12358581 Eutrema salsugineum
Thhalv10018768m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 12356582-12358581 Eutrema salsugineum
Thhalv10018768m.g 2.0kb downstream 2.0kb downstream 4960 true scaffold_9: 12351622-12356581 Eutrema salsugineum
Thhalv10018768m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 12351622-12353621 Eutrema salsugineum
Thhalv10018768m.g 5.0kb upstream 5.0kb upstream 7960 true scaffold_9: 12353622-12361581 Eutrema salsugineum
Thhalv10018768m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 12356582-12361581 Eutrema salsugineum
Thhalv10018768m.g 5.0kb downstream 5.0kb downstream 7960 true scaffold_9: 12348622-12356581 Eutrema salsugineum
Thhalv10018768m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 12348622-12353621 Eutrema salsugineum
Thhalv10018768m.g 10.0kb upstream 10.0kb upstream 12960 true scaffold_9: 12353622-12366581 Eutrema salsugineum
Thhalv10018768m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 12356582-12366581 Eutrema salsugineum
Thhalv10018768m.g 10.0kb downstream 10.0kb downstream 12960 true scaffold_9: 12343622-12356581 Eutrema salsugineum
Thhalv10018768m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 12343622-12353621 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371725 5261 Brassicaceae View MSA
123839002 5264 Brassicales-Malvales View MSA
124342588 5266 SBM View MSA
124238021 5268 Malvidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain