Gene : Thhalv10018722m.g E. salsugineum v1.0
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  540
Name:  ? Thhalv10018722m.g Secondary Identifier:  ? PAC:20191809
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ARGSYNBSUB-PWY Eutrema salsugineum pathologic  
Esalsugineum ARGSYN-PWY Eutrema salsugineum pathologic  
Esalsugineum CITRULBIO-PWY Eutrema salsugineum pathologic  
Esalsugineum CITRULLINE-DEG-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-4984 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10018722m.g 0.5kb upstream 0.5kb upstream 3023 true scaffold_9: 2331990-2335012 Eutrema salsugineum
Thhalv10018722m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2331990-2332489 Eutrema salsugineum
Thhalv10018722m.g 0.5kb downstream 0.5kb downstream 3023 true scaffold_9: 2332490-2335512 Eutrema salsugineum
Thhalv10018722m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2335013-2335512 Eutrema salsugineum
Thhalv10018722m.g 1.0kb upstream 1.0kb upstream 3523 true scaffold_9: 2331490-2335012 Eutrema salsugineum
Thhalv10018722m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2331490-2332489 Eutrema salsugineum
Thhalv10018722m.g 1.0kb downstream 1.0kb downstream 3523 true scaffold_9: 2332490-2336012 Eutrema salsugineum
Thhalv10018722m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2335013-2336012 Eutrema salsugineum
Thhalv10018722m.g 2.0kb upstream 2.0kb upstream 4523 true scaffold_9: 2330490-2335012 Eutrema salsugineum
Thhalv10018722m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2330490-2332489 Eutrema salsugineum
Thhalv10018722m.g 2.0kb downstream 2.0kb downstream 4523 true scaffold_9: 2332490-2337012 Eutrema salsugineum
Thhalv10018722m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2335013-2337012 Eutrema salsugineum
Thhalv10018722m.g 5.0kb upstream 5.0kb upstream 7523 true scaffold_9: 2327490-2335012 Eutrema salsugineum
Thhalv10018722m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2327490-2332489 Eutrema salsugineum
Thhalv10018722m.g 5.0kb downstream 5.0kb downstream 7523 true scaffold_9: 2332490-2340012 Eutrema salsugineum
Thhalv10018722m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2335013-2340012 Eutrema salsugineum
Thhalv10018722m.g 10.0kb upstream 10.0kb upstream 12523 true scaffold_9: 2322490-2335012 Eutrema salsugineum
Thhalv10018722m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2322490-2332489 Eutrema salsugineum
Thhalv10018722m.g 10.0kb downstream 10.0kb downstream 12523 true scaffold_9: 2332490-2345012 Eutrema salsugineum
Thhalv10018722m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2335013-2345012 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365362 5261 Brassicaceae View MSA
123830074 5264 Brassicales-Malvales View MSA
124343183 5266 SBM View MSA
124239745 5268 Malvidae View MSA
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain