Gene : Brdisv20Bd21Ref1037779m.g B. distachyon Bd21 AnntCtrl v1
Defline:  (1 of 5) PF02992//PF13960//PF13963 - Transposase family tnp2 (Transposase_21) // Domain of unknown function (DUF4218) (DUF4218) // Transposase-associated domain (Transpos_assoc) Genomic Order:  1505
Name:  ? Brdisv20Bd21Ref1037779m.g Secondary Identifier:  ? PAC:33453496
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv20Bd21Ref1037779m.g 0.5kb upstream 0.5kb upstream 3928 true Bd4: 11476442-11480369 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 0.5kb upstream 0.5kb upstream 500 false Bd4: 11479870-11480369 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 0.5kb downstream 0.5kb downstream 3928 true Bd4: 11475942-11479869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 0.5kb downstream 0.5kb downstream 500 false Bd4: 11475942-11476441 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 1.0kb upstream 1.0kb upstream 4428 true Bd4: 11476442-11480869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 1.0kb upstream 1.0kb upstream 1000 false Bd4: 11479870-11480869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 1.0kb downstream 1.0kb downstream 4428 true Bd4: 11475442-11479869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 1.0kb downstream 1.0kb downstream 1000 false Bd4: 11475442-11476441 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 2.0kb upstream 2.0kb upstream 5428 true Bd4: 11476442-11481869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 2.0kb upstream 2.0kb upstream 2000 false Bd4: 11479870-11481869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 2.0kb downstream 2.0kb downstream 5428 true Bd4: 11474442-11479869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 2.0kb downstream 2.0kb downstream 2000 false Bd4: 11474442-11476441 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 5.0kb upstream 5.0kb upstream 8428 true Bd4: 11476442-11484869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 5.0kb upstream 5.0kb upstream 5000 false Bd4: 11479870-11484869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 5.0kb downstream 5.0kb downstream 8428 true Bd4: 11471442-11479869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 5.0kb downstream 5.0kb downstream 5000 false Bd4: 11471442-11476441 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 10.0kb upstream 10.0kb upstream 13428 true Bd4: 11476442-11489869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 10.0kb upstream 10.0kb upstream 10000 false Bd4: 11479870-11489869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 10.0kb downstream 10.0kb downstream 13428 true Bd4: 11466442-11479869 Brachypodium distachyon Bd21 AnntCtrl
Brdisv20Bd21Ref1037779m.g 10.0kb downstream 10.0kb downstream 10000 false Bd4: 11466442-11476441 Brachypodium distachyon Bd21 AnntCtrl

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66123675 5043 BrachyPan View MSA

0 Rna Seq Expressions

1 Strain

DB identifier