Gene : Brdisv1pangenome1011376m.g B. distachyon Pangenome v1

Defline:  (1 of 3) PTHR10314//PTHR10314:SF1 - SER/THR DEHYDRATASE, TRP SYNTHASE // THREONINE SYNTHASE-LIKE 2 Genomic Order:  2
Name:  ? Brdisv1pangenome1011376m.g Secondary Identifier:  ? PAC:33619246

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyonpangenome HOMOSER-THRESYN-PWY Brachypodium distachyon Pangenome pathologic  
Bdistachyonpangenome PWY-3001 Brachypodium distachyon Pangenome pathologic  
Bdistachyonpangenome PWY-724 Brachypodium distachyon Pangenome pathologic  
Bdistachyonpangenome THRESYN-PWY Brachypodium distachyon Pangenome pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1pangenome1011376m.g 0.5kb upstream 0.5kb upstream 1910 true 6_9163336_9490: 7457-9366 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 0.5kb upstream 0.5kb upstream 500 false 6_9163336_9490: 8867-9366 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 0.5kb downstream 0.5kb downstream 1910 true 6_9163336_9490: 6957-8866 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 0.5kb downstream 0.5kb downstream 500 false 6_9163336_9490: 6957-7456 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 1.0kb upstream 1.0kb upstream 2034 true 6_9163336_9490: 7457-9490 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 1.0kb upstream 1.0kb upstream 624 false 6_9163336_9490: 8867-9490 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 1.0kb downstream 1.0kb downstream 2410 true 6_9163336_9490: 6457-8866 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 1.0kb downstream 1.0kb downstream 1000 false 6_9163336_9490: 6457-7456 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 2.0kb upstream 2.0kb upstream 2034 true 6_9163336_9490: 7457-9490 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 2.0kb upstream 2.0kb upstream 624 false 6_9163336_9490: 8867-9490 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 2.0kb downstream 2.0kb downstream 3410 true 6_9163336_9490: 5457-8866 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 2.0kb downstream 2.0kb downstream 2000 false 6_9163336_9490: 5457-7456 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 5.0kb upstream 5.0kb upstream 2034 true 6_9163336_9490: 7457-9490 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 5.0kb upstream 5.0kb upstream 624 false 6_9163336_9490: 8867-9490 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 5.0kb downstream 5.0kb downstream 6410 true 6_9163336_9490: 2457-8866 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 5.0kb downstream 5.0kb downstream 5000 false 6_9163336_9490: 2457-7456 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 10.0kb upstream 10.0kb upstream 2034 true 6_9163336_9490: 7457-9490 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 10.0kb upstream 10.0kb upstream 624 false 6_9163336_9490: 8867-9490 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 10.0kb downstream 10.0kb downstream 8866 true 6_9163336_9490: 1-8866 Brachypodium distachyon Pangenome
Brdisv1pangenome1011376m.g 10.0kb downstream 10.0kb downstream 7456 false 6_9163336_9490: 1-7456 Brachypodium distachyon Pangenome

0 Protein Family

0 Rna Seq Expressions

1 Strain

DB identifier