Gene : Ciclev10002827m.g C. clementina v1.0
Defline:  (1 of 2) PTHR11735:SF14 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE-RELATED Genomic Order:  47
Name:  ? Ciclev10002827m.g Secondary Identifier:  ? PAC:20788118
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY0-1587 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10002827m.g 0.5kb upstream 0.5kb upstream 2459 true scaffold_5: 505079-507537 Citrus clementina
Ciclev10002827m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 505079-505578 Citrus clementina
Ciclev10002827m.g 0.5kb downstream 0.5kb downstream 2459 true scaffold_5: 505579-508037 Citrus clementina
Ciclev10002827m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 507538-508037 Citrus clementina
Ciclev10002827m.g 1.0kb upstream 1.0kb upstream 2959 true scaffold_5: 504579-507537 Citrus clementina
Ciclev10002827m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 504579-505578 Citrus clementina
Ciclev10002827m.g 1.0kb downstream 1.0kb downstream 2959 true scaffold_5: 505579-508537 Citrus clementina
Ciclev10002827m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 507538-508537 Citrus clementina
Ciclev10002827m.g 2.0kb upstream 2.0kb upstream 3959 true scaffold_5: 503579-507537 Citrus clementina
Ciclev10002827m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 503579-505578 Citrus clementina
Ciclev10002827m.g 2.0kb downstream 2.0kb downstream 3959 true scaffold_5: 505579-509537 Citrus clementina
Ciclev10002827m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 507538-509537 Citrus clementina
Ciclev10002827m.g 5.0kb upstream 5.0kb upstream 6959 true scaffold_5: 500579-507537 Citrus clementina
Ciclev10002827m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 500579-505578 Citrus clementina
Ciclev10002827m.g 5.0kb downstream 5.0kb downstream 6959 true scaffold_5: 505579-512537 Citrus clementina
Ciclev10002827m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 507538-512537 Citrus clementina
Ciclev10002827m.g 10.0kb upstream 10.0kb upstream 11959 true scaffold_5: 495579-507537 Citrus clementina
Ciclev10002827m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 495579-505578 Citrus clementina
Ciclev10002827m.g 10.0kb downstream 10.0kb downstream 11959 true scaffold_5: 505579-517537 Citrus clementina
Ciclev10002827m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 507538-517537 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792089 5273 Angiosperm View MSA
124325623 5266 SBM Singleton cluster - no MSA
124171104 5268 Malvidae Singleton cluster - no MSA
124073168 5270 Rosid View MSA
123743876 5271 Pentapetalae View MSA
122796342 5272 Eudicot View MSA
121063343 5274 Embryophyte View MSA
123103100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain