Gene : Ciclev10030103m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11777:SF14 - ALANINE--TRNA LIGASE, CHLOROPLASTIC-RELATED Genomic Order:  103
Name:  ? Ciclev10030103m.g Secondary Identifier:  ? PAC:20813144
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina TRNA-CHARGING-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10030103m.g 0.5kb upstream 0.5kb upstream 6016 true scaffold_8: 643660-649675 Citrus clementina
Ciclev10030103m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 643660-644159 Citrus clementina
Ciclev10030103m.g 0.5kb downstream 0.5kb downstream 6016 true scaffold_8: 644160-650175 Citrus clementina
Ciclev10030103m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 649676-650175 Citrus clementina
Ciclev10030103m.g 1.0kb upstream 1.0kb upstream 6516 true scaffold_8: 643160-649675 Citrus clementina
Ciclev10030103m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 643160-644159 Citrus clementina
Ciclev10030103m.g 1.0kb downstream 1.0kb downstream 6516 true scaffold_8: 644160-650675 Citrus clementina
Ciclev10030103m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 649676-650675 Citrus clementina
Ciclev10030103m.g 2.0kb upstream 2.0kb upstream 7516 true scaffold_8: 642160-649675 Citrus clementina
Ciclev10030103m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 642160-644159 Citrus clementina
Ciclev10030103m.g 2.0kb downstream 2.0kb downstream 7516 true scaffold_8: 644160-651675 Citrus clementina
Ciclev10030103m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 649676-651675 Citrus clementina
Ciclev10030103m.g 5.0kb upstream 5.0kb upstream 10516 true scaffold_8: 639160-649675 Citrus clementina
Ciclev10030103m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 639160-644159 Citrus clementina
Ciclev10030103m.g 5.0kb downstream 5.0kb downstream 10516 true scaffold_8: 644160-654675 Citrus clementina
Ciclev10030103m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 649676-654675 Citrus clementina
Ciclev10030103m.g 10.0kb upstream 10.0kb upstream 15516 true scaffold_8: 634160-649675 Citrus clementina
Ciclev10030103m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 634160-644159 Citrus clementina
Ciclev10030103m.g 10.0kb downstream 10.0kb downstream 15516 true scaffold_8: 644160-659675 Citrus clementina
Ciclev10030103m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 649676-659675 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345364 5266 SBM View MSA
124242500 5268 Malvidae View MSA
124064161 5270 Rosid View MSA
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain