Gene : Ciclev10019590m.g C. clementina v1.0
Defline:  (1 of 1) PTHR10742:SF294 - PROTOPORPHYRINOGEN OXIDASE 1, CHLOROPLASTIC Genomic Order:  3922
Name:  ? Ciclev10019590m.g Secondary Identifier:  ? PAC:20809843
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina CHLOROPHYLL-SYN Citrus clementina pathologic  
Cclementina HEME-BIOSYNTHESIS-II Citrus clementina pathologic  
Cclementina PWY-5918 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10019590m.g 0.5kb upstream 0.5kb upstream 4869 true scaffold_3: 47139756-47144624 Citrus clementina
Ciclev10019590m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 47144125-47144624 Citrus clementina
Ciclev10019590m.g 0.5kb downstream 0.5kb downstream 4869 true scaffold_3: 47139256-47144124 Citrus clementina
Ciclev10019590m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 47139256-47139755 Citrus clementina
Ciclev10019590m.g 1.0kb upstream 1.0kb upstream 5369 true scaffold_3: 47139756-47145124 Citrus clementina
Ciclev10019590m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 47144125-47145124 Citrus clementina
Ciclev10019590m.g 1.0kb downstream 1.0kb downstream 5369 true scaffold_3: 47138756-47144124 Citrus clementina
Ciclev10019590m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 47138756-47139755 Citrus clementina
Ciclev10019590m.g 2.0kb upstream 2.0kb upstream 6369 true scaffold_3: 47139756-47146124 Citrus clementina
Ciclev10019590m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 47144125-47146124 Citrus clementina
Ciclev10019590m.g 2.0kb downstream 2.0kb downstream 6369 true scaffold_3: 47137756-47144124 Citrus clementina
Ciclev10019590m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 47137756-47139755 Citrus clementina
Ciclev10019590m.g 5.0kb upstream 5.0kb upstream 9369 true scaffold_3: 47139756-47149124 Citrus clementina
Ciclev10019590m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 47144125-47149124 Citrus clementina
Ciclev10019590m.g 5.0kb downstream 5.0kb downstream 9369 true scaffold_3: 47134756-47144124 Citrus clementina
Ciclev10019590m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 47134756-47139755 Citrus clementina
Ciclev10019590m.g 10.0kb upstream 10.0kb upstream 14369 true scaffold_3: 47139756-47154124 Citrus clementina
Ciclev10019590m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 47144125-47154124 Citrus clementina
Ciclev10019590m.g 10.0kb downstream 10.0kb downstream 14369 true scaffold_3: 47129756-47144124 Citrus clementina
Ciclev10019590m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 47129756-47139755 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343518 5266 SBM View MSA
124242274 5268 Malvidae View MSA
124065931 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain