Gene : Ciclev10023978m.g C. clementina v1.0
Defline:  (1 of 1) PF00124 - Photosynthetic reaction centre protein (Photo_RC) Genomic Order:  1568
Name:  ? Ciclev10023978m.g Secondary Identifier:  ? PAC:20811707
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PHOTOALL-PWY Citrus clementina pathologic  
Cclementina PWY-101 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10023978m.g 0.5kb upstream 0.5kb upstream 2525 true scaffold_3: 18211676-18214200 Citrus clementina
Ciclev10023978m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 18211676-18212175 Citrus clementina
Ciclev10023978m.g 0.5kb downstream 0.5kb downstream 2525 true scaffold_3: 18212176-18214700 Citrus clementina
Ciclev10023978m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 18214201-18214700 Citrus clementina
Ciclev10023978m.g 1.0kb upstream 1.0kb upstream 3025 true scaffold_3: 18211176-18214200 Citrus clementina
Ciclev10023978m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 18211176-18212175 Citrus clementina
Ciclev10023978m.g 1.0kb downstream 1.0kb downstream 3025 true scaffold_3: 18212176-18215200 Citrus clementina
Ciclev10023978m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 18214201-18215200 Citrus clementina
Ciclev10023978m.g 2.0kb upstream 2.0kb upstream 4025 true scaffold_3: 18210176-18214200 Citrus clementina
Ciclev10023978m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 18210176-18212175 Citrus clementina
Ciclev10023978m.g 2.0kb downstream 2.0kb downstream 4025 true scaffold_3: 18212176-18216200 Citrus clementina
Ciclev10023978m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 18214201-18216200 Citrus clementina
Ciclev10023978m.g 5.0kb upstream 5.0kb upstream 7025 true scaffold_3: 18207176-18214200 Citrus clementina
Ciclev10023978m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 18207176-18212175 Citrus clementina
Ciclev10023978m.g 5.0kb downstream 5.0kb downstream 7025 true scaffold_3: 18212176-18219200 Citrus clementina
Ciclev10023978m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 18214201-18219200 Citrus clementina
Ciclev10023978m.g 10.0kb upstream 10.0kb upstream 12025 true scaffold_3: 18202176-18214200 Citrus clementina
Ciclev10023978m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 18202176-18212175 Citrus clementina
Ciclev10023978m.g 10.0kb downstream 10.0kb downstream 12025 true scaffold_3: 18212176-18224200 Citrus clementina
Ciclev10023978m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 18214201-18224200 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124325058 5266 SBM Singleton cluster - no MSA
124254176 5268 Malvidae View MSA
124074858 5270 Rosid View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain