Gene : Ciclev10027074m.g C. clementina v1.0
Defline:  (1 of 26) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1377
Name:  ? Ciclev10027074m.g Secondary Identifier:  ? PAC:20800014
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-1081 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10027074m.g 0.5kb upstream 0.5kb upstream 3063 true scaffold_7: 11155001-11158063 Citrus clementina
Ciclev10027074m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11155001-11155500 Citrus clementina
Ciclev10027074m.g 0.5kb downstream 0.5kb downstream 3063 true scaffold_7: 11155501-11158563 Citrus clementina
Ciclev10027074m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11158064-11158563 Citrus clementina
Ciclev10027074m.g 1.0kb upstream 1.0kb upstream 3563 true scaffold_7: 11154501-11158063 Citrus clementina
Ciclev10027074m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11154501-11155500 Citrus clementina
Ciclev10027074m.g 1.0kb downstream 1.0kb downstream 3563 true scaffold_7: 11155501-11159063 Citrus clementina
Ciclev10027074m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11158064-11159063 Citrus clementina
Ciclev10027074m.g 2.0kb upstream 2.0kb upstream 4563 true scaffold_7: 11153501-11158063 Citrus clementina
Ciclev10027074m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11153501-11155500 Citrus clementina
Ciclev10027074m.g 2.0kb downstream 2.0kb downstream 4563 true scaffold_7: 11155501-11160063 Citrus clementina
Ciclev10027074m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11158064-11160063 Citrus clementina
Ciclev10027074m.g 5.0kb upstream 5.0kb upstream 7563 true scaffold_7: 11150501-11158063 Citrus clementina
Ciclev10027074m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11150501-11155500 Citrus clementina
Ciclev10027074m.g 5.0kb downstream 5.0kb downstream 7563 true scaffold_7: 11155501-11163063 Citrus clementina
Ciclev10027074m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11158064-11163063 Citrus clementina
Ciclev10027074m.g 10.0kb upstream 10.0kb upstream 12563 true scaffold_7: 11145501-11158063 Citrus clementina
Ciclev10027074m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11145501-11155500 Citrus clementina
Ciclev10027074m.g 10.0kb downstream 10.0kb downstream 12563 true scaffold_7: 11155501-11168063 Citrus clementina
Ciclev10027074m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11158064-11168063 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351120 5266 SBM View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain