Gene : Ciclev10025372m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11680//PTHR11680:SF8 - SERINE HYDROXYMETHYLTRANSFERASE Genomic Order:  640
Name:  ? Ciclev10025372m.g Secondary Identifier:  ? PAC:20801688
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina GLYSYN-PWY Citrus clementina pathologic  
Cclementina PWY-2161 Citrus clementina pathologic  
Cclementina PWY-3841 Citrus clementina pathologic  
Cclementina SER-GLYSYN-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10025372m.g 0.5kb upstream 0.5kb upstream 6224 true scaffold_7: 4882520-4888743 Citrus clementina
Ciclev10025372m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4888244-4888743 Citrus clementina
Ciclev10025372m.g 0.5kb downstream 0.5kb downstream 6224 true scaffold_7: 4882020-4888243 Citrus clementina
Ciclev10025372m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4882020-4882519 Citrus clementina
Ciclev10025372m.g 1.0kb upstream 1.0kb upstream 6724 true scaffold_7: 4882520-4889243 Citrus clementina
Ciclev10025372m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4888244-4889243 Citrus clementina
Ciclev10025372m.g 1.0kb downstream 1.0kb downstream 6724 true scaffold_7: 4881520-4888243 Citrus clementina
Ciclev10025372m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4881520-4882519 Citrus clementina
Ciclev10025372m.g 2.0kb upstream 2.0kb upstream 7724 true scaffold_7: 4882520-4890243 Citrus clementina
Ciclev10025372m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4888244-4890243 Citrus clementina
Ciclev10025372m.g 2.0kb downstream 2.0kb downstream 7724 true scaffold_7: 4880520-4888243 Citrus clementina
Ciclev10025372m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4880520-4882519 Citrus clementina
Ciclev10025372m.g 5.0kb upstream 5.0kb upstream 10724 true scaffold_7: 4882520-4893243 Citrus clementina
Ciclev10025372m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4888244-4893243 Citrus clementina
Ciclev10025372m.g 5.0kb downstream 5.0kb downstream 10724 true scaffold_7: 4877520-4888243 Citrus clementina
Ciclev10025372m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4877520-4882519 Citrus clementina
Ciclev10025372m.g 10.0kb upstream 10.0kb upstream 15724 true scaffold_7: 4882520-4898243 Citrus clementina
Ciclev10025372m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4888244-4898243 Citrus clementina
Ciclev10025372m.g 10.0kb downstream 10.0kb downstream 15724 true scaffold_7: 4872520-4888243 Citrus clementina
Ciclev10025372m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4872520-4882519 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337498 5266 SBM View MSA
124238878 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain