Gene : Ciclev10003717m.g C. clementina v1.0
Defline:  (1 of 2) PTHR31642:SF24 - HXXXD-TYPE ACYL-TRANSFERASE-LIKE PROTEIN Genomic Order:  1188
Name:  ? Ciclev10003717m.g Secondary Identifier:  ? PAC:20785447
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-4203 Citrus clementina pathologic  
Cclementina PWY-5835 Citrus clementina pathologic  
Cclementina PWY-6801 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10003717m.g 0.5kb upstream 0.5kb upstream 1856 true scaffold_5: 28889496-28891351 Citrus clementina
Ciclev10003717m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28890852-28891351 Citrus clementina
Ciclev10003717m.g 0.5kb downstream 0.5kb downstream 1856 true scaffold_5: 28888996-28890851 Citrus clementina
Ciclev10003717m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28888996-28889495 Citrus clementina
Ciclev10003717m.g 1.0kb upstream 1.0kb upstream 2356 true scaffold_5: 28889496-28891851 Citrus clementina
Ciclev10003717m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28890852-28891851 Citrus clementina
Ciclev10003717m.g 1.0kb downstream 1.0kb downstream 2356 true scaffold_5: 28888496-28890851 Citrus clementina
Ciclev10003717m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28888496-28889495 Citrus clementina
Ciclev10003717m.g 2.0kb upstream 2.0kb upstream 3356 true scaffold_5: 28889496-28892851 Citrus clementina
Ciclev10003717m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28890852-28892851 Citrus clementina
Ciclev10003717m.g 2.0kb downstream 2.0kb downstream 3356 true scaffold_5: 28887496-28890851 Citrus clementina
Ciclev10003717m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28887496-28889495 Citrus clementina
Ciclev10003717m.g 5.0kb upstream 5.0kb upstream 6356 true scaffold_5: 28889496-28895851 Citrus clementina
Ciclev10003717m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 28890852-28895851 Citrus clementina
Ciclev10003717m.g 5.0kb downstream 5.0kb downstream 6356 true scaffold_5: 28884496-28890851 Citrus clementina
Ciclev10003717m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28884496-28889495 Citrus clementina
Ciclev10003717m.g 10.0kb upstream 10.0kb upstream 11356 true scaffold_5: 28889496-28900851 Citrus clementina
Ciclev10003717m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28890852-28900851 Citrus clementina
Ciclev10003717m.g 10.0kb downstream 10.0kb downstream 11356 true scaffold_5: 28879496-28890851 Citrus clementina
Ciclev10003717m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28879496-28889495 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342757 5266 SBM View MSA
124242615 5268 Malvidae View MSA
124061522 5270 Rosid View MSA
123756556 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain