Gene : Ciclev10019364m.g C. clementina v1.0
Defline:  (1 of 1) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Genomic Order:  2209
Name:  ? Ciclev10019364m.g Secondary Identifier:  ? PAC:20806187
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-695 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10019364m.g 0.5kb upstream 0.5kb upstream 2837 true scaffold_3: 29351854-29354690 Citrus clementina
Ciclev10019364m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 29354191-29354690 Citrus clementina
Ciclev10019364m.g 0.5kb downstream 0.5kb downstream 2837 true scaffold_3: 29351354-29354190 Citrus clementina
Ciclev10019364m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 29351354-29351853 Citrus clementina
Ciclev10019364m.g 1.0kb upstream 1.0kb upstream 3337 true scaffold_3: 29351854-29355190 Citrus clementina
Ciclev10019364m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 29354191-29355190 Citrus clementina
Ciclev10019364m.g 1.0kb downstream 1.0kb downstream 3337 true scaffold_3: 29350854-29354190 Citrus clementina
Ciclev10019364m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 29350854-29351853 Citrus clementina
Ciclev10019364m.g 2.0kb upstream 2.0kb upstream 4337 true scaffold_3: 29351854-29356190 Citrus clementina
Ciclev10019364m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 29354191-29356190 Citrus clementina
Ciclev10019364m.g 2.0kb downstream 2.0kb downstream 4337 true scaffold_3: 29349854-29354190 Citrus clementina
Ciclev10019364m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 29349854-29351853 Citrus clementina
Ciclev10019364m.g 5.0kb upstream 5.0kb upstream 7337 true scaffold_3: 29351854-29359190 Citrus clementina
Ciclev10019364m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 29354191-29359190 Citrus clementina
Ciclev10019364m.g 5.0kb downstream 5.0kb downstream 7337 true scaffold_3: 29346854-29354190 Citrus clementina
Ciclev10019364m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 29346854-29351853 Citrus clementina
Ciclev10019364m.g 10.0kb upstream 10.0kb upstream 12337 true scaffold_3: 29351854-29364190 Citrus clementina
Ciclev10019364m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 29354191-29364190 Citrus clementina
Ciclev10019364m.g 10.0kb downstream 10.0kb downstream 12337 true scaffold_3: 29341854-29354190 Citrus clementina
Ciclev10019364m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 29341854-29351853 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350973 5266 SBM View MSA
124250838 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain