Protein Family : nine-cis-epoxycarotenoid dioxygenase 3 124250838

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  59

59 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29693.t000030 (1 of 1) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED R. communis v0.1 1824   29693: 274350-276173
30202.t000015 (1 of 1) PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED R. communis v0.1 1812   30202: 171735-173546
orange1.1g007291m.g (1 of 1) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED C. sinensis v1.1 1934   scaffold00007: 1681143-1683076
orange1.1g007379m.g (1 of 1) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED C. sinensis v1.1 2183   scaffold00206: 221164-223346
AT3G14440 (1 of 2) PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED A. thaliana TAIR10 NCED3 2312   Chr3: 4831288-4833599
AT1G30100 (1 of 2) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED A. thaliana TAIR10 NCED5 2026   Chr1: 10571340-10573365
AT1G78390 (1 of 2) PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED A. thaliana TAIR10 NCED9 1981   Chr1: 29490895-29492875
Thhalv10020337m.g (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1806   scaffold_13: 4533695-4535500
Thhalv10007160m.g (1 of 2) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1889   scaffold_5: 4666425-4668313
Thhalv10019707m.g (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1836   scaffold_9: 967486-969321
Ciclev10019364m.g (1 of 1) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED C. clementina v1.0 2337   scaffold_3: 29351854-29354190
Ciclev10014639m.g (1 of 1) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED C. clementina v1.0 2376   scaffold_2: 35235517-35237892
Lus10008443.g (1 of 1) PTHR10543//PTHR10543:SF45 - BETA-CAROTENE DIOXYGENASE L. usitatissimum v1.0 1490   scaffold61: 283075-284564
Lus10026185.g (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED L. usitatissimum v1.0 1578   scaffold898: 48113-49690
Gorai.002G038100 (1 of 11) 1.13.11.51 - 9-cis-epoxycarotenoid dioxygenase / VP14 G. raimondii v2.1 1970   Chr02: 3022101-3024070
Gorai.013G177100 (1 of 11) 1.13.11.51 - 9-cis-epoxycarotenoid dioxygenase / VP14 G. raimondii v2.1 2231   Chr13: 46897510-46899740
Gorai.009G154600 (1 of 11) 1.13.11.51 - 9-cis-epoxycarotenoid dioxygenase / VP14 G. raimondii v2.1 1858   Chr09: 11849678-11851535
Gorai.010G166900 (1 of 11) 1.13.11.51 - 9-cis-epoxycarotenoid dioxygenase / VP14 G. raimondii v2.1 2270   Chr10: 48420417-48422686
Gorai.011G045200 (1 of 11) 1.13.11.51 - 9-cis-epoxycarotenoid dioxygenase / VP14 G. raimondii v2.1 2132   Chr11: 3433693-3435824
Thecc1EG029468 (1 of 2) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED T. cacao v1.1 2615   scaffold_6: 22769314-22771928
Thecc1EG032343 (1 of 2) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED T. cacao v1.1 2594   scaffold_7: 10275098-10277691
Thecc1EG032512 (1 of 5) 1.14.99.42 - Zeaxanthin 7,8-dioxygenase / Zeaxanthin 7,8(7',8')-cleavage dioxygenase T. cacao v1.1 2144   scaffold_7: 11478381-11480524
Thecc1EG041198 (1 of 13) 1.13.11.51 - 9-cis-epoxycarotenoid dioxygenase / VP14 T. cacao v1.1 1775   scaffold_9: 36094077-36095851
Araha.11938s0002 (1 of 2) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED A. halleri v1.1 1551   Scaffold11938: 14743-16293
Araha.16132s0001 (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED A. halleri v1.1 1275   Scaffold16132: 6018-7292
Araha.24237s0009 (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED A. halleri v1.1 2107   Scaffold24237: 43394-45500
Cagra.1582s0029 (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1741   Scaffold1582: 115855-117595
Cagra.0096s0001 (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1836   Scaffold96: 3594-5429
Cagra.5647s0005 (1 of 2) PTHR10543:SF42 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED2, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1791   Scaffold5647: 19575-21365
Brara.A03189 (1 of 5) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED B. rapa FPsc v1.3 2262   A01: 26693339-26695600

59 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29693.m001992 R. communis v0.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 2 5268 Malvidae
orange1.1g007379m C. sinensis v1.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 2 5268 Malvidae
AT1G78390.1 A. thaliana TAIR10 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
AT3G14440.1 A. thaliana TAIR10 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
Ciclev10014639m C. clementina v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 2 5268 Malvidae
Gorai.010G166900.1 G. raimondii v2.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 5 5268 Malvidae
Thecc1EG041198t1 T. cacao v1.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
Thecc1EG032512t1 T. cacao v1.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
Araha.16132s0001.1.p A. halleri v1.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
Brara.E02677.1.p B. rapa FPsc v1.3 124250838 nine-cis-epoxycarotenoid dioxygenase 3 5 5268 Malvidae
SapurV1A.0617s0010.1.p S. purpurea v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
SapurV1A.0232s0090.1.p S. purpurea v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
AL60U10070.t1 A. lyrata v2.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
AL3G26820.t1 A. lyrata v2.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
Potri.011G084100.1.p P. trichocarpa v3.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
Potri.001G393800.1.p P. trichocarpa v3.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
Podel.04G195600.1.p P. deltoides WV94 v2.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
Podel.11G109600.1.p P. deltoides WV94 v2.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
Podel.11G084100.1.p P. deltoides WV94 v2.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 4 5268 Malvidae
Carub.0001s2832.1.p C. rubella v1.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
30202.m000262 R. communis v0.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 2 5268 Malvidae
orange1.1g007291m C. sinensis v1.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 2 5268 Malvidae
AT1G30100.1 A. thaliana TAIR10 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
Thhalv10007160m E. salsugineum v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
Thhalv10019707m E. salsugineum v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
Thhalv10020337m E. salsugineum v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 3 5268 Malvidae
Ciclev10019364m C. clementina v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 2 5268 Malvidae
Lus10026185 L. usitatissimum v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 2 5268 Malvidae
Lus10008443 L. usitatissimum v1.0 124250838 nine-cis-epoxycarotenoid dioxygenase 3 2 5268 Malvidae
Gorai.009G154600.1 G. raimondii v2.1 124250838 nine-cis-epoxycarotenoid dioxygenase 3 5 5268 Malvidae