Gene : Thecc1EG032512 T. cacao v1.1

Defline:  (1 of 5) 1.14.99.42 - Zeaxanthin 7,8-dioxygenase / Zeaxanthin 7,8(7',8')-cleavage dioxygenase Genomic Order:  1483
Name:  ? Thecc1EG032512 Secondary Identifier:  ? PAC:27446608

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG032512 0.5kb upstream 0.5kb upstream 2644 true scaffold_7: 11478381-11481024 Theobroma cacao
Thecc1EG032512 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11480525-11481024 Theobroma cacao
Thecc1EG032512 0.5kb downstream 0.5kb downstream 2644 true scaffold_7: 11477881-11480524 Theobroma cacao
Thecc1EG032512 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11477881-11478380 Theobroma cacao
Thecc1EG032512 1.0kb upstream 1.0kb upstream 3144 true scaffold_7: 11478381-11481524 Theobroma cacao
Thecc1EG032512 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11480525-11481524 Theobroma cacao
Thecc1EG032512 1.0kb downstream 1.0kb downstream 3144 true scaffold_7: 11477381-11480524 Theobroma cacao
Thecc1EG032512 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11477381-11478380 Theobroma cacao
Thecc1EG032512 2.0kb upstream 2.0kb upstream 4144 true scaffold_7: 11478381-11482524 Theobroma cacao
Thecc1EG032512 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11480525-11482524 Theobroma cacao
Thecc1EG032512 2.0kb downstream 2.0kb downstream 4144 true scaffold_7: 11476381-11480524 Theobroma cacao
Thecc1EG032512 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11476381-11478380 Theobroma cacao
Thecc1EG032512 5.0kb upstream 5.0kb upstream 7144 true scaffold_7: 11478381-11485524 Theobroma cacao
Thecc1EG032512 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11480525-11485524 Theobroma cacao
Thecc1EG032512 5.0kb downstream 5.0kb downstream 7144 true scaffold_7: 11473381-11480524 Theobroma cacao
Thecc1EG032512 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11473381-11478380 Theobroma cacao
Thecc1EG032512 10.0kb upstream 10.0kb upstream 12144 true scaffold_7: 11478381-11490524 Theobroma cacao
Thecc1EG032512 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11480525-11490524 Theobroma cacao
Thecc1EG032512 10.0kb downstream 10.0kb downstream 12144 true scaffold_7: 11468381-11480524 Theobroma cacao
Thecc1EG032512 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11468381-11478380 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841953 5264 Brassicales-Malvales View MSA
124323141 5266 SBM View MSA
124250838 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain