Gene : Lus10026185.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Genomic Order:  13
Name:  ? Lus10026185.g Secondary Identifier:  ? PAC:23156560
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-695 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10026185.g 0.5kb upstream 0.5kb upstream 2078 true scaffold898: 47613-49690 Linum usitatissimum
Lus10026185.g 0.5kb upstream 0.5kb upstream 500 false scaffold898: 47613-48112 Linum usitatissimum
Lus10026185.g 0.5kb downstream 0.5kb downstream 2078 true scaffold898: 48113-50190 Linum usitatissimum
Lus10026185.g 0.5kb downstream 0.5kb downstream 500 false scaffold898: 49691-50190 Linum usitatissimum
Lus10026185.g 1.0kb upstream 1.0kb upstream 2578 true scaffold898: 47113-49690 Linum usitatissimum
Lus10026185.g 1.0kb upstream 1.0kb upstream 1000 false scaffold898: 47113-48112 Linum usitatissimum
Lus10026185.g 1.0kb downstream 1.0kb downstream 2578 true scaffold898: 48113-50690 Linum usitatissimum
Lus10026185.g 1.0kb downstream 1.0kb downstream 1000 false scaffold898: 49691-50690 Linum usitatissimum
Lus10026185.g 2.0kb upstream 2.0kb upstream 3578 true scaffold898: 46113-49690 Linum usitatissimum
Lus10026185.g 2.0kb upstream 2.0kb upstream 2000 false scaffold898: 46113-48112 Linum usitatissimum
Lus10026185.g 2.0kb downstream 2.0kb downstream 3578 true scaffold898: 48113-51690 Linum usitatissimum
Lus10026185.g 2.0kb downstream 2.0kb downstream 2000 false scaffold898: 49691-51690 Linum usitatissimum
Lus10026185.g 5.0kb upstream 5.0kb upstream 6578 true scaffold898: 43113-49690 Linum usitatissimum
Lus10026185.g 5.0kb upstream 5.0kb upstream 5000 false scaffold898: 43113-48112 Linum usitatissimum
Lus10026185.g 5.0kb downstream 5.0kb downstream 6578 true scaffold898: 48113-54690 Linum usitatissimum
Lus10026185.g 5.0kb downstream 5.0kb downstream 5000 false scaffold898: 49691-54690 Linum usitatissimum
Lus10026185.g 10.0kb upstream 10.0kb upstream 11578 true scaffold898: 38113-49690 Linum usitatissimum
Lus10026185.g 10.0kb upstream 10.0kb upstream 10000 false scaffold898: 38113-48112 Linum usitatissimum
Lus10026185.g 10.0kb downstream 10.0kb downstream 11578 true scaffold898: 48113-59690 Linum usitatissimum
Lus10026185.g 10.0kb downstream 10.0kb downstream 10000 false scaffold898: 49691-59690 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461041 5262 Malpighiales View MSA
124250838 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain