Gene : Ciclev10020902m.g C. clementina v1.0
Defline:  (1 of 1) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  1539
Name:  ? Ciclev10020902m.g Secondary Identifier:  ? PAC:20809665
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10020902m.g 0.5kb upstream 0.5kb upstream 2069 true scaffold_3: 17561127-17563195 Citrus clementina
Ciclev10020902m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 17562696-17563195 Citrus clementina
Ciclev10020902m.g 0.5kb downstream 0.5kb downstream 2069 true scaffold_3: 17560627-17562695 Citrus clementina
Ciclev10020902m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 17560627-17561126 Citrus clementina
Ciclev10020902m.g 1.0kb upstream 1.0kb upstream 2569 true scaffold_3: 17561127-17563695 Citrus clementina
Ciclev10020902m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 17562696-17563695 Citrus clementina
Ciclev10020902m.g 1.0kb downstream 1.0kb downstream 2569 true scaffold_3: 17560127-17562695 Citrus clementina
Ciclev10020902m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 17560127-17561126 Citrus clementina
Ciclev10020902m.g 2.0kb upstream 2.0kb upstream 3569 true scaffold_3: 17561127-17564695 Citrus clementina
Ciclev10020902m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 17562696-17564695 Citrus clementina
Ciclev10020902m.g 2.0kb downstream 2.0kb downstream 3569 true scaffold_3: 17559127-17562695 Citrus clementina
Ciclev10020902m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 17559127-17561126 Citrus clementina
Ciclev10020902m.g 5.0kb upstream 5.0kb upstream 6569 true scaffold_3: 17561127-17567695 Citrus clementina
Ciclev10020902m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 17562696-17567695 Citrus clementina
Ciclev10020902m.g 5.0kb downstream 5.0kb downstream 6569 true scaffold_3: 17556127-17562695 Citrus clementina
Ciclev10020902m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 17556127-17561126 Citrus clementina
Ciclev10020902m.g 10.0kb upstream 10.0kb upstream 11569 true scaffold_3: 17561127-17572695 Citrus clementina
Ciclev10020902m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 17562696-17572695 Citrus clementina
Ciclev10020902m.g 10.0kb downstream 10.0kb downstream 11569 true scaffold_3: 17551127-17562695 Citrus clementina
Ciclev10020902m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 17551127-17561126 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340184 5266 SBM View MSA
124254333 5268 Malvidae View MSA
124062824 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain