Gene : Ciclev10014964m.g C. clementina v1.0
Defline:  (1 of 1) PTHR10742:SF229 - PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  1166
Name:  ? Ciclev10014964m.g Secondary Identifier:  ? PAC:20815351
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina CHLOROPHYLL-SYN Citrus clementina pathologic  
Cclementina HEME-BIOSYNTHESIS-II Citrus clementina pathologic  
Cclementina PWY-5918 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10014964m.g 0.5kb upstream 0.5kb upstream 8335 true scaffold_2: 13941409-13949743 Citrus clementina
Ciclev10014964m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 13949244-13949743 Citrus clementina
Ciclev10014964m.g 0.5kb downstream 0.5kb downstream 8335 true scaffold_2: 13940909-13949243 Citrus clementina
Ciclev10014964m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 13940909-13941408 Citrus clementina
Ciclev10014964m.g 1.0kb upstream 1.0kb upstream 8835 true scaffold_2: 13941409-13950243 Citrus clementina
Ciclev10014964m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 13949244-13950243 Citrus clementina
Ciclev10014964m.g 1.0kb downstream 1.0kb downstream 8835 true scaffold_2: 13940409-13949243 Citrus clementina
Ciclev10014964m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 13940409-13941408 Citrus clementina
Ciclev10014964m.g 2.0kb upstream 2.0kb upstream 9835 true scaffold_2: 13941409-13951243 Citrus clementina
Ciclev10014964m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 13949244-13951243 Citrus clementina
Ciclev10014964m.g 2.0kb downstream 2.0kb downstream 9835 true scaffold_2: 13939409-13949243 Citrus clementina
Ciclev10014964m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 13939409-13941408 Citrus clementina
Ciclev10014964m.g 5.0kb upstream 5.0kb upstream 12835 true scaffold_2: 13941409-13954243 Citrus clementina
Ciclev10014964m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 13949244-13954243 Citrus clementina
Ciclev10014964m.g 5.0kb downstream 5.0kb downstream 12835 true scaffold_2: 13936409-13949243 Citrus clementina
Ciclev10014964m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 13936409-13941408 Citrus clementina
Ciclev10014964m.g 10.0kb upstream 10.0kb upstream 17835 true scaffold_2: 13941409-13959243 Citrus clementina
Ciclev10014964m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 13949244-13959243 Citrus clementina
Ciclev10014964m.g 10.0kb downstream 10.0kb downstream 17835 true scaffold_2: 13931409-13949243 Citrus clementina
Ciclev10014964m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 13931409-13941408 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344124 5266 SBM View MSA
124241673 5268 Malvidae View MSA
124068806 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain