Gene : Ciclev10004711m.g C. clementina v1.0
Defline:  (1 of 1) PTHR21089//PTHR21089:SF12 - SHIKIMATE DEHYDROGENASE Genomic Order:  334
Name:  ? Ciclev10004711m.g Secondary Identifier:  ? PAC:20790845
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina ARO-PWY Citrus clementina pathologic  
Cclementina PWY-6163 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10004711m.g 0.5kb upstream 0.5kb upstream 6360 true scaffold_9: 2302858-2309217 Citrus clementina
Ciclev10004711m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2302858-2303357 Citrus clementina
Ciclev10004711m.g 0.5kb downstream 0.5kb downstream 6360 true scaffold_9: 2303358-2309717 Citrus clementina
Ciclev10004711m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2309218-2309717 Citrus clementina
Ciclev10004711m.g 1.0kb upstream 1.0kb upstream 6860 true scaffold_9: 2302358-2309217 Citrus clementina
Ciclev10004711m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2302358-2303357 Citrus clementina
Ciclev10004711m.g 1.0kb downstream 1.0kb downstream 6860 true scaffold_9: 2303358-2310217 Citrus clementina
Ciclev10004711m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2309218-2310217 Citrus clementina
Ciclev10004711m.g 2.0kb upstream 2.0kb upstream 7860 true scaffold_9: 2301358-2309217 Citrus clementina
Ciclev10004711m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2301358-2303357 Citrus clementina
Ciclev10004711m.g 2.0kb downstream 2.0kb downstream 7860 true scaffold_9: 2303358-2311217 Citrus clementina
Ciclev10004711m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2309218-2311217 Citrus clementina
Ciclev10004711m.g 5.0kb upstream 5.0kb upstream 10860 true scaffold_9: 2298358-2309217 Citrus clementina
Ciclev10004711m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2298358-2303357 Citrus clementina
Ciclev10004711m.g 5.0kb downstream 5.0kb downstream 10860 true scaffold_9: 2303358-2314217 Citrus clementina
Ciclev10004711m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2309218-2314217 Citrus clementina
Ciclev10004711m.g 10.0kb upstream 10.0kb upstream 15860 true scaffold_9: 2293358-2309217 Citrus clementina
Ciclev10004711m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2293358-2303357 Citrus clementina
Ciclev10004711m.g 10.0kb downstream 10.0kb downstream 15860 true scaffold_9: 2303358-2319217 Citrus clementina
Ciclev10004711m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2309218-2319217 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341830 5266 SBM View MSA
124242776 5268 Malvidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain