Gene : Lus10006218.g L. usitatissimum v1.0
Defline:  (1 of 3) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  20
Name:  ? Lus10006218.g Secondary Identifier:  ? PAC:23139698
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-6689 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10006218.g 0.5kb upstream 0.5kb upstream 2969 true scaffold1140: 93121-96089 Linum usitatissimum
Lus10006218.g 0.5kb upstream 0.5kb upstream 500 false scaffold1140: 95590-96089 Linum usitatissimum
Lus10006218.g 0.5kb downstream 0.5kb downstream 2969 true scaffold1140: 92621-95589 Linum usitatissimum
Lus10006218.g 0.5kb downstream 0.5kb downstream 500 false scaffold1140: 92621-93120 Linum usitatissimum
Lus10006218.g 1.0kb upstream 1.0kb upstream 3469 true scaffold1140: 93121-96589 Linum usitatissimum
Lus10006218.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1140: 95590-96589 Linum usitatissimum
Lus10006218.g 1.0kb downstream 1.0kb downstream 3469 true scaffold1140: 92121-95589 Linum usitatissimum
Lus10006218.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1140: 92121-93120 Linum usitatissimum
Lus10006218.g 2.0kb upstream 2.0kb upstream 4469 true scaffold1140: 93121-97589 Linum usitatissimum
Lus10006218.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1140: 95590-97589 Linum usitatissimum
Lus10006218.g 2.0kb downstream 2.0kb downstream 4469 true scaffold1140: 91121-95589 Linum usitatissimum
Lus10006218.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1140: 91121-93120 Linum usitatissimum
Lus10006218.g 5.0kb upstream 5.0kb upstream 7469 true scaffold1140: 93121-100589 Linum usitatissimum
Lus10006218.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1140: 95590-100589 Linum usitatissimum
Lus10006218.g 5.0kb downstream 5.0kb downstream 7469 true scaffold1140: 88121-95589 Linum usitatissimum
Lus10006218.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1140: 88121-93120 Linum usitatissimum
Lus10006218.g 10.0kb upstream 10.0kb upstream 12469 true scaffold1140: 93121-105589 Linum usitatissimum
Lus10006218.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1140: 95590-105589 Linum usitatissimum
Lus10006218.g 10.0kb downstream 10.0kb downstream 12469 true scaffold1140: 83121-95589 Linum usitatissimum
Lus10006218.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1140: 83121-93120 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121556236 5273 Angiosperm Singleton cluster - no MSA
122415300 5262 Malpighiales Singleton cluster - no MSA
124208293 5268 Malvidae Singleton cluster - no MSA
123926791 5270 Rosid Singleton cluster - no MSA
123506565 5271 Pentapetalae Singleton cluster - no MSA
122541650 5272 Eudicot Singleton cluster - no MSA
120828810 5274 Embryophyte Singleton cluster - no MSA
122870135 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain