Gene : Lus10027778.g L. usitatissimum v1.0
Defline:  (1 of 3) 2.3.1.133//2.3.1.99 - Quinate O-hydroxycinnamoyltransferase / Hydroxycinnamoyl coenzyme A-quinate transferase Genomic Order:  66
Name:  ? Lus10027778.g Secondary Identifier:  ? PAC:23157030
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-361 Linum usitatissimum pathologic  
Lusitatissimum PWY-6040 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10027778.g 0.5kb upstream 0.5kb upstream 725 true scaffold1143: 327219-327943 Linum usitatissimum
Lus10027778.g 0.5kb upstream 0.5kb upstream 500 false scaffold1143: 327444-327943 Linum usitatissimum
Lus10027778.g 0.5kb downstream 0.5kb downstream 725 true scaffold1143: 326719-327443 Linum usitatissimum
Lus10027778.g 0.5kb downstream 0.5kb downstream 500 false scaffold1143: 326719-327218 Linum usitatissimum
Lus10027778.g 1.0kb upstream 1.0kb upstream 1225 true scaffold1143: 327219-328443 Linum usitatissimum
Lus10027778.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1143: 327444-328443 Linum usitatissimum
Lus10027778.g 1.0kb downstream 1.0kb downstream 1225 true scaffold1143: 326219-327443 Linum usitatissimum
Lus10027778.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1143: 326219-327218 Linum usitatissimum
Lus10027778.g 2.0kb upstream 2.0kb upstream 2225 true scaffold1143: 327219-329443 Linum usitatissimum
Lus10027778.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1143: 327444-329443 Linum usitatissimum
Lus10027778.g 2.0kb downstream 2.0kb downstream 2225 true scaffold1143: 325219-327443 Linum usitatissimum
Lus10027778.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1143: 325219-327218 Linum usitatissimum
Lus10027778.g 5.0kb upstream 5.0kb upstream 5225 true scaffold1143: 327219-332443 Linum usitatissimum
Lus10027778.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1143: 327444-332443 Linum usitatissimum
Lus10027778.g 5.0kb downstream 5.0kb downstream 5225 true scaffold1143: 322219-327443 Linum usitatissimum
Lus10027778.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1143: 322219-327218 Linum usitatissimum
Lus10027778.g 10.0kb upstream 10.0kb upstream 10225 true scaffold1143: 327219-337443 Linum usitatissimum
Lus10027778.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1143: 327444-337443 Linum usitatissimum
Lus10027778.g 10.0kb downstream 10.0kb downstream 10225 true scaffold1143: 317219-327443 Linum usitatissimum
Lus10027778.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1143: 317219-327218 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122415343 5262 Malpighiales Singleton cluster - no MSA
124250442 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain