Gene : Lus10024930.g L. usitatissimum v1.0
Defline:  (1 of 3) PTHR13763 - BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 Genomic Order:  143
Name:  ? Lus10024930.g Secondary Identifier:  ? PAC:23178835
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10024930.g 0.5kb upstream 0.5kb upstream 3762 true scaffold473: 807672-811433 Linum usitatissimum
Lus10024930.g 0.5kb upstream 0.5kb upstream 500 false scaffold473: 807672-808171 Linum usitatissimum
Lus10024930.g 0.5kb downstream 0.5kb downstream 3762 true scaffold473: 808172-811933 Linum usitatissimum
Lus10024930.g 0.5kb downstream 0.5kb downstream 500 false scaffold473: 811434-811933 Linum usitatissimum
Lus10024930.g 1.0kb upstream 1.0kb upstream 4262 true scaffold473: 807172-811433 Linum usitatissimum
Lus10024930.g 1.0kb upstream 1.0kb upstream 1000 false scaffold473: 807172-808171 Linum usitatissimum
Lus10024930.g 1.0kb downstream 1.0kb downstream 4262 true scaffold473: 808172-812433 Linum usitatissimum
Lus10024930.g 1.0kb downstream 1.0kb downstream 1000 false scaffold473: 811434-812433 Linum usitatissimum
Lus10024930.g 2.0kb upstream 2.0kb upstream 5262 true scaffold473: 806172-811433 Linum usitatissimum
Lus10024930.g 2.0kb upstream 2.0kb upstream 2000 false scaffold473: 806172-808171 Linum usitatissimum
Lus10024930.g 2.0kb downstream 2.0kb downstream 5262 true scaffold473: 808172-813433 Linum usitatissimum
Lus10024930.g 2.0kb downstream 2.0kb downstream 2000 false scaffold473: 811434-813433 Linum usitatissimum
Lus10024930.g 5.0kb upstream 5.0kb upstream 8262 true scaffold473: 803172-811433 Linum usitatissimum
Lus10024930.g 5.0kb upstream 5.0kb upstream 5000 false scaffold473: 803172-808171 Linum usitatissimum
Lus10024930.g 5.0kb downstream 5.0kb downstream 8262 true scaffold473: 808172-816433 Linum usitatissimum
Lus10024930.g 5.0kb downstream 5.0kb downstream 5000 false scaffold473: 811434-816433 Linum usitatissimum
Lus10024930.g 10.0kb upstream 10.0kb upstream 13262 true scaffold473: 798172-811433 Linum usitatissimum
Lus10024930.g 10.0kb upstream 10.0kb upstream 10000 false scaffold473: 798172-808171 Linum usitatissimum
Lus10024930.g 10.0kb downstream 10.0kb downstream 13262 true scaffold473: 808172-821433 Linum usitatissimum
Lus10024930.g 10.0kb downstream 10.0kb downstream 10000 false scaffold473: 811434-821433 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456732 5262 Malpighiales View MSA
124249547 5268 Malvidae View MSA
124074324 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain