Gene : Lus10024848.g L. usitatissimum v1.0
Defline:  (1 of 1) PF00170//PF00290//PF12498 - bZIP transcription factor (bZIP_1) // Tryptophan synthase alpha chain (Trp_syntA) // Basic leucine-zipper C terminal (bZIP_C) Genomic Order:  61
Name:  ? Lus10024848.g Secondary Identifier:  ? PAC:23178949
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRPSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10024848.g 0.5kb upstream 0.5kb upstream 7719 true scaffold473: 364613-372331 Linum usitatissimum
Lus10024848.g 0.5kb upstream 0.5kb upstream 500 false scaffold473: 371832-372331 Linum usitatissimum
Lus10024848.g 0.5kb downstream 0.5kb downstream 7719 true scaffold473: 364113-371831 Linum usitatissimum
Lus10024848.g 0.5kb downstream 0.5kb downstream 500 false scaffold473: 364113-364612 Linum usitatissimum
Lus10024848.g 1.0kb upstream 1.0kb upstream 8219 true scaffold473: 364613-372831 Linum usitatissimum
Lus10024848.g 1.0kb upstream 1.0kb upstream 1000 false scaffold473: 371832-372831 Linum usitatissimum
Lus10024848.g 1.0kb downstream 1.0kb downstream 8219 true scaffold473: 363613-371831 Linum usitatissimum
Lus10024848.g 1.0kb downstream 1.0kb downstream 1000 false scaffold473: 363613-364612 Linum usitatissimum
Lus10024848.g 2.0kb upstream 2.0kb upstream 9219 true scaffold473: 364613-373831 Linum usitatissimum
Lus10024848.g 2.0kb upstream 2.0kb upstream 2000 false scaffold473: 371832-373831 Linum usitatissimum
Lus10024848.g 2.0kb downstream 2.0kb downstream 9219 true scaffold473: 362613-371831 Linum usitatissimum
Lus10024848.g 2.0kb downstream 2.0kb downstream 2000 false scaffold473: 362613-364612 Linum usitatissimum
Lus10024848.g 5.0kb upstream 5.0kb upstream 12219 true scaffold473: 364613-376831 Linum usitatissimum
Lus10024848.g 5.0kb upstream 5.0kb upstream 5000 false scaffold473: 371832-376831 Linum usitatissimum
Lus10024848.g 5.0kb downstream 5.0kb downstream 12219 true scaffold473: 359613-371831 Linum usitatissimum
Lus10024848.g 5.0kb downstream 5.0kb downstream 5000 false scaffold473: 359613-364612 Linum usitatissimum
Lus10024848.g 10.0kb upstream 10.0kb upstream 17219 true scaffold473: 364613-381831 Linum usitatissimum
Lus10024848.g 10.0kb upstream 10.0kb upstream 10000 false scaffold473: 371832-381831 Linum usitatissimum
Lus10024848.g 10.0kb downstream 10.0kb downstream 17219 true scaffold473: 354613-371831 Linum usitatissimum
Lus10024848.g 10.0kb downstream 10.0kb downstream 10000 false scaffold473: 354613-364612 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122428062 5262 Malpighiales View MSA
124245191 5268 Malvidae View MSA
124072253 5270 Rosid View MSA
123743642 5271 Pentapetalae View MSA
122785904 5272 Eudicot View MSA
122051376 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350237 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain