Gene : Lus10017522.g L. usitatissimum v1.0
Defline:  (1 of 2) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase Genomic Order:  78
Name:  ? Lus10017522.g Secondary Identifier:  ? PAC:23163175
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7560 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10017522.g 0.5kb upstream 0.5kb upstream 2101 true scaffold1253: 391650-393750 Linum usitatissimum
Lus10017522.g 0.5kb upstream 0.5kb upstream 500 false scaffold1253: 393251-393750 Linum usitatissimum
Lus10017522.g 0.5kb downstream 0.5kb downstream 2101 true scaffold1253: 391150-393250 Linum usitatissimum
Lus10017522.g 0.5kb downstream 0.5kb downstream 500 false scaffold1253: 391150-391649 Linum usitatissimum
Lus10017522.g 1.0kb upstream 1.0kb upstream 2601 true scaffold1253: 391650-394250 Linum usitatissimum
Lus10017522.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1253: 393251-394250 Linum usitatissimum
Lus10017522.g 1.0kb downstream 1.0kb downstream 2601 true scaffold1253: 390650-393250 Linum usitatissimum
Lus10017522.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1253: 390650-391649 Linum usitatissimum
Lus10017522.g 2.0kb upstream 2.0kb upstream 3601 true scaffold1253: 391650-395250 Linum usitatissimum
Lus10017522.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1253: 393251-395250 Linum usitatissimum
Lus10017522.g 2.0kb downstream 2.0kb downstream 3601 true scaffold1253: 389650-393250 Linum usitatissimum
Lus10017522.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1253: 389650-391649 Linum usitatissimum
Lus10017522.g 5.0kb upstream 5.0kb upstream 6601 true scaffold1253: 391650-398250 Linum usitatissimum
Lus10017522.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1253: 393251-398250 Linum usitatissimum
Lus10017522.g 5.0kb downstream 5.0kb downstream 6601 true scaffold1253: 386650-393250 Linum usitatissimum
Lus10017522.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1253: 386650-391649 Linum usitatissimum
Lus10017522.g 10.0kb upstream 10.0kb upstream 11601 true scaffold1253: 391650-403250 Linum usitatissimum
Lus10017522.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1253: 393251-403250 Linum usitatissimum
Lus10017522.g 10.0kb downstream 10.0kb downstream 11601 true scaffold1253: 381650-393250 Linum usitatissimum
Lus10017522.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1253: 381650-391649 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464102 5262 Malpighiales View MSA
124238483 5268 Malvidae View MSA
124062148 5270 Rosid View MSA
123737612 5271 Pentapetalae View MSA
122786124 5272 Eudicot View MSA
122042234 5273 Angiosperm View MSA
121344039 5274 Embryophyte View MSA
123423768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain